Streptomyces deccanensis: L3078_10235
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Entry
L3078_10235 CDS
T08215
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sdec
Streptomyces deccanensis
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdec03009
]
L3078_10235
Enzymes [BR:
sdec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
L3078_10235
Ribosome biogenesis [BR:
sdec03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
L3078_10235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ULR49640
LinkDB
All DBs
Position
complement(2296192..2297367)
Genome browser
AA seq
391 aa
AA seq
DB search
MRSSSGRNSSGNNGGSRGGNSGGRGGSGGGRGGSGAGRGGSGGSGGGRGNYRGAGNDRDD
RQGGRPKKPRPEERRYDVGPGGTQEGPKSGRGASARGGAKGGPKQGQGSTGRGRWAPATS
REYDARAEERNRERYAGKKDVKLPKTFPGAEQEGERLQKVLARAGYGSRRACEELIEQAR
VEVNGEIVLEQGKRVDPEKDEVKVDGLTVATQSYQFFALNKPAGVVSTMEDNEGRQCLGD
YVTNRETRLFHVGRLDTETEGVILLTNHGELAHRLTHPKYGVKKVYLAHIVGPIPRDLGK
QLKDGIQLEDGYARADHFRVVEQTGKNYLVEVTLHEGRKHIVRRMLAEAGFPVDKLVRVA
FGPITLGDQKSGWLRRLSNTEVGMLMQEVDL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagcagcagcggcaggaacagcagcggaaacaacggcgggagccgtggtggcaac
agcggcggccgcggcggaagcggtggtggacgcggcgggagcggcgccggacgcggcggg
agcggcgggagcggtggtggccgcggcaactaccgtggcgcgggcaacgaccgcgacgac
aggcagggtggtcggccgaagaagccccgccccgaggagcgccgttacgacgtgggcccc
ggcggcacacaggaggggccgaagtcggggcgcggcgcgtccgcgcgaggtggagccaag
ggcgggcccaagcagggtcagggcagcaccgggcgaggccggtgggccccggcgacctcg
cgcgagtacgacgcgcgggccgaggagcgcaaccgcgagcgctacgcgggcaagaaggac
gtgaagctgcccaagaccttcccgggcgccgagcaggagggcgagcggctgcagaaggtc
ctcgcgcgggcgggctacggctcgcggcgggcctgcgaggagctgatcgagcaggcgcgg
gtcgaggtgaacggcgagatcgtgctggagcagggcaagcgcgtcgacccggagaaggac
gaggtcaaggtcgacggtctgaccgtggccacgcagtcgtaccagttcttcgcgctgaac
aagccggccggcgtcgtctccacgatggaggacaacgagggccggcagtgcctcggtgac
tatgtgaccaaccgcgagacgcggctgttccacgtcggacggctcgacaccgagaccgag
ggcgtcatcctgctcaccaaccacggtgagctggcgcaccggctgacccaccccaagtac
ggcgtgaagaaggtctatctcgcgcacatcgtgggcccgatcccgcgcgacctgggcaag
cagctcaaggacggcatccagctggaggacgggtacgcgcgcgcggaccacttccgggtc
gtcgagcagaccggcaagaactacctcgtcgaggtgaccctgcacgaggggcgcaagcac
atcgtgcgccggatgctggcggaggccggcttcccggtcgacaagctggtgcgcgtcgcc
ttcgggccgatcaccctcggcgaccagaagtcgggctggctgcgccgcctgtcgaacacc
gaggtcggcatgctgatgcaggaggtcgacctctag
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