Streptomyces deccanensis: L3078_10965
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Entry
L3078_10965 CDS
T08215
Name
(GenBank) pectinesterase family protein
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sdec
Streptomyces deccanensis
Pathway
sdec00040
Pentose and glucuronate interconversions
sdec01100
Metabolic pathways
sdec02020
Two-component system
sdec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
L3078_10965
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L3078_10965
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L3078_10965
Enzymes [BR:
sdec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
L3078_10965
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
L3078_10965
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Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ULR49778
LinkDB
All DBs
Position
complement(2455582..2457591)
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AA seq
669 aa
AA seq
DB search
MTHLRSKRLPHKGRALAAVTALIASFVVGAFTPAEAAGPATAADATAGYGAAPRWSDRPH
GFASLDGGTTGGAGGKVVTVTDQASLVRYASAEEPYVIRVKGTVDVEPFGSDVVVTSNKT
IIGVGDSAEIVHGELHLNPGTSNVIIRNLTIRDSYVEGDWDGKTTDFDAIQMDTVDHVWI
DHNRFEHMGDGLLDIRKDSRYVTVSHNQFRNHNKALGIGWTTNVQTEITIDHNWFTGTKQ
RNPSADNCAYAHLYNNYLSAQVADGDPVWTYGNWARGRTRMVIENSYYDGVQHPYQADAT
AELVQRGSILKNVTGRQEAWGTAFDPRDFYRYRLDPAAAVPALVTRFSGPQKGIGTNTVL
NVPGDYATVQAAVDAVPAGNDGTVTIRIAPGIYRAKVLIPANKPNLVLQGTGQDRSDTVI
VFDTPAANGGSNGSATVRILASDVTARNLTFSNDFDEAAHEVNGEQALAMKTTGDRIVFE
NTAFLGNQDTLMTDSPKLDVISRVYIRDSYIEGDVDFIYGRVTTVIERSLIKALSRGSDS
NNGYITAASTWKENPYGFLITRSKVVSDAPAGTYHLGRPWHPGGEPDAIAQVLFRETELP
AAIKSSPWTDMSGFSWKDARFTEYRTYGPGAAVTADRPQLERSDTSAHTVTKYLAGTDGW
APHRGRAGH
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacctccgtagcaagcgcttgccgcacaaggggagagccctcgccgccgtcacc
gccctgatcgcctcgttcgtcgtcggcgcgttcaccccggcggaggccgccgggcccgcc
acggccgccgacgccaccgccgggtacggcgcggcaccccgctggagcgaccgcccccac
ggcttcgcctccctcgacggcggcaccaccggcggcgcgggcggcaaggtcgtgaccgtc
accgaccaggcctccctggtgcggtacgcgtccgccgaggagccgtacgtcatccgggtc
aaggggaccgtcgacgtcgaacccttcggctccgacgtcgtcgtgacctcgaacaagacg
atcatcggcgtcggcgacagtgccgaaatcgtccacggcgaactgcacctcaaccccggc
accagcaacgtcatcatccgcaatctgacgatccgggactcctacgtcgagggcgactgg
gacggcaagaccaccgacttcgacgcgatccagatggacaccgtcgaccacgtctggatc
gaccacaaccgcttcgagcacatgggcgacgggctcctcgacatccgcaaggacagccgg
tacgtcaccgtctcccacaaccagttcaggaaccacaacaaggccctcggcatcggctgg
acgaccaatgtccaaaccgagatcaccatcgaccacaactggttcaccggcaccaaacag
cgcaacccctccgccgacaactgcgcctacgcccacctctacaacaactacctctcggcg
caggtggccgacggcgaccccgtgtggacgtacgggaactgggcgcgcggccggaccagg
atggtcatcgagaacagctactacgacggtgtccagcacccctaccaggccgacgccacc
gccgagttggttcagcgcgggtcgatcctgaagaacgtcaccggacggcaggaggcctgg
ggcacggccttcgacccgagggacttctaccgctaccggctcgacccggccgccgccgtc
cccgcgctggtcacccggttctccggcccgcagaagggcatcggcacgaacaccgtgctg
aacgtccccggcgactacgcgaccgtgcaggcagccgtggacgccgtgcccgccggcaac
gacggcaccgtcacgatccgcatcgcgcccggcatctaccgcgccaaggtcctgatcccc
gcgaacaagccgaacctggtgctgcaggggactggacaagatcgctcggacaccgtcatc
gtcttcgacacgcccgcagcgaacggcggctccaacggcagcgccaccgtgcggatcctc
gccagtgacgtgaccgcccgcaacctcaccttcagcaacgacttcgacgaggccgcgcac
gaggtgaacggcgagcaggcgctcgcgatgaagaccaccggcgaccggatcgtcttcgag
aacacggccttcctgggcaaccaggacacgctgatgaccgacagccccaagctcgacgtc
atcagccgcgtctacatccgcgactcgtacatcgagggcgatgtcgacttcatctacggc
cgggtcaccaccgtcatcgagcgttccctgatcaaggcgctcagccggggctcggacagc
aacaacggctacatcacggccgcctcgacctggaaggagaacccctacgggttcctcatc
acccggtcgaaggtcgtcagcgacgcgcccgccgggacgtaccacctcggccggccctgg
cacccgggcggcgagccggacgcgatcgcccaggtgctgttccgggagaccgaactgccc
gccgcgatcaagtcgtcgccgtggacggacatgagcggcttctcctggaaggacgcgcgg
ttcacggagtaccggacgtacgggcccggggccgccgtcaccgccgaccggccgcagctc
gagcgttccgacacctcggcccacacggtcaccaagtacctcgcggggacggacggctgg
gcgccgcatcgcggtcgcgccggccactga
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