Stutzerimonas degradans: GOM96_06225
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Entry
GOM96_06225 CDS
T08431
Symbol
gcl
Name
(GenBank) glyoxylate carboligase
KO
K01608
tartronate-semialdehyde synthase [EC:
4.1.1.47
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg00630
Glyoxylate and dicarboxylate metabolism
sdeg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GOM96_06225 (gcl)
Enzymes [BR:
sdeg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.47 tartronate-semialdehyde synthase
GOM96_06225 (gcl)
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GFIT
Motif
Pfam:
TPP_enzyme_C
TPP_enzyme_M
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
QGW20585
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Position
1342989..1344770
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AA seq
593 aa
AA seq
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MARMRAIDAAVAVLRKEGIDTAFGIPGAAINPLYSALRADGGIRHILARHVEGASHMAEG
YTRTKAGNIGVCIGTSGPAGTDMITGLYSAWADSIPILCITGQAPRARLYKEDFQAVDIE
SIAKPVTKWAVTVREPALVPRVFQQAFHVMRSGRPGPVLIDLPFDVQMAEIEFDVDTYEP
LSVYKPAATRKQIEKAIDMLCAAERPLIVAGGGIYNAGAEALLVEFAETVGVPVIPTLMG
WGSIPDDHPLMAGMCGLQTSHRYGNANMLASDFVLGIGNRWANRHTGSVEVYTKGRKFVH
VDIEPTQIGRVFSPDYGITSDAGAALKLFVEVAKERKAAGQLPDRSSWAADCHERKRTML
RKTHFDSVPMKPQRVYQCMNNAFGKDACYVSTIGLSQIAAAQFLHVYKPRHWINCGQAGP
LGWTIPAALGVVAADPSRKVVALSGDYDFQFMIEELAVGAQFKLPYIHILVNNAYLGLIR
QAQRGFEMDYCVQLGFENINADQSGMEGYGVDHVAVVEGLGCKAIRVFKQEDLRPAIEQA
QAWMAEHQVPVVIEVILERVTNIAMGTEIDAINEFEPLAEGREDAPTAVGLLD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcatgagagcaatcgacgccgccgtcgcggtactgcgcaaggagggcatcgac
accgccttcggcattcccggcgcggcgatcaacccgctgtattccgccctgcgtgccgat
ggcggcatccgccacattcttgcccgccacgtcgagggcgcctcgcacatggccgagggc
tacacccgcaccaaggccggcaacatcggcgtgtgcatcggcacctccggcccggccggc
accgacatgatcaccggcctctactcggcctgggccgattccatcccgattctctgcatc
accggccaggcgccgcgtgcccgcctttacaaggaagacttccaggccgtggacatcgag
tccatcgccaagccggtgaccaagtgggcggtgaccgtgcgtgagccggcgctggtgccg
cgcgtgttccagcaggccttccacgtgatgcgctcgggccgtccgggtccggtgctgatc
gacctgccgttcgacgtgcagatggccgagatcgagttcgacgtcgatacctacgagccg
ctttccgtctacaagccggcggccacccgcaagcagatcgagaaagccatcgacatgctc
tgcgccgccgagcgcccgctgatcgtcgccggtggcggcatctataacgccggtgccgaa
gcgctgctggtggagttcgccgagaccgtcggcgtgccggtgatcccgacgctgatgggc
tggggctcgatccccgatgaccacccgttgatggccggcatgtgcggcctgcagaccagc
caccgctacggcaacgcgaacatgctggcgtccgacttcgtgctcggcatcggcaaccgc
tgggccaaccgccacaccggctcggtcgaggtctataccaagggccgcaagttcgtccac
gtggacatcgagccgacgcagattggccgggtgttctcgccggactacggcatcacctcc
gatgccggcgccgcgctgaagctgttcgtcgaggtcgccaaagagcgcaaggccgccggc
cagttgccggatcgcagcagctgggctgccgactgccatgagcgcaagcgcacgatgctg
cgcaagacccacttcgacagcgtgccgatgaagccgcagcgcgtgtaccagtgcatgaac
aacgcgttcggcaaggacgcctgctacgtcagcaccatcggcctgtcgcagatcgccgcc
gcgcagttcctgcacgtctacaagccgcgccactggatcaactgcggccaggccggcccg
ctcggctggaccattccggcggcgctcggcgtggtcgccgcggacccgtcgcgcaaggtg
gtggcgctctcgggtgactacgacttccagttcatgatcgaggagctggccgtgggtgcg
cagttcaagctgccgtacatccacatcctggtgaacaacgcctacctcggcctgattcgc
caggcgcagcgcggcttcgagatggattactgcgtgcagctgggcttcgagaacatcaat
gccgaccagagcggcatggaaggctacggcgtcgaccacgtcgcggtggtcgagggcctg
ggctgcaaggcgatccgcgtgttcaagcaggaagacctgcgcccggccatcgaacaggcc
caggcctggatggccgagcatcaggtgccggtggtgatcgaggtgatcctcgagcgggtg
accaacatcgccatgggcaccgagatcgacgccatcaacgagttcgagccgctggccgaa
ggccgggaggatgcgccgacggcggttgggttgctggattga
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