Stutzerimonas degradans: GOM96_16655
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Entry
GOM96_16655 CDS
T08431
Symbol
srpB
Name
(GenBank) solvent efflux RND transporter permease subunit SrpB
KO
K18138
multidrug efflux pump
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg01501
beta-Lactam resistance
sdeg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GOM96_16655 (srpB)
01503 Cationic antimicrobial peptide (CAMP) resistance
GOM96_16655 (srpB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeg02000
]
GOM96_16655 (srpB)
01504 Antimicrobial resistance genes [BR:
sdeg01504
]
GOM96_16655 (srpB)
Transporters [BR:
sdeg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GOM96_16655 (srpB)
Antimicrobial resistance genes [BR:
sdeg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GOM96_16655 (srpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
SecD-TM1
DUF4232
Motif
Other DBs
NCBI-ProteinID:
QGW22567
LinkDB
All DBs
Position
3536689..3539835
Genome browser
AA seq
1048 aa
AA seq
DB search
MSRFFIDRPIFAWVLAIVAMLAGALSLVKMPISQYPNIAAPAVAIQVSYPGASAQTVQDT
VVQVIEQQLSGLDGFRYMSAESNSDGSMTIIVTFEQGTNPDIAQVQVQNKLQLATPRLPE
EVQRQGLRVVKYQKNFFLIIGLADTTGKMTNFDLGNLIASQLQDPISRIDGVGDYLLFGS
PYAMRIWLDPAKLNSYQLTPGDVANAIREQNVQVSSGQLGGLPTLSGVQLNATVLGKTRM
TTPEEFEEILVKVKADGSQVRVKDIARVELGADNFSISSKRNGEPSAGLALRLASGGNLL
ETVAAVKAAMEKQKAYLPEGVEVVYPYDTTPVVEASISSVVHTIIEAVVLVFLVMYLFLQ
NFRATLIPTLAVPVVLLGAFALLPYFGLSINVLTMYAMVLAIGLLVDDAIVVVENVERLM
HEEGLSPLEATRKSMGQIQGALVGIGLVLSAVFVPMAFFGGSAGIIYKQFAVTIVLCMGL
SVLVALIFTPALCATILKKPKGDAHHEKKGFFGWFNRTFERGTTRFERGVGGMLKHRGRY
LLAFVLITAGTGYLFTQIPKAFLPNEDQGLMMVEVRMPVNSSAERTGAVLQQVQDYLKEE
EGELIQHVLTVNGFNFAGRGQNSGLGLVMLKGWDQRAAEGQDVFSIAERANAHFATIKDA
TVMAFVPPAILEMGNAMGFNLYLQDNAGVGHAALMEARNQFLQLAGEHPKLRAVRPNGKD
DEPQFQVNIDDEKARALQVSIASINQTMSAAWGSMYVNDFIDRGRVKRVYIQGEETARIT
PEDFDKWYVRNALGEMVPFSAFATGEWTFGSPKLERYGGISSVEILGEPAPGYSTGDAMV
AIAEIMQQLPPGIGLSYTGLSYEEIQTGDQAPMLYALTVLIVFLCLAALYESWSVPAAVM
LVVPLGILGSVLATLFRDLTADVYFQIGLMTTVGLSAKNAILIVEFAKDLYEKEGMPLVQ
AAVHAARLRLRPIVMTSLAFTFGVLPMALASGAGAGSQHSVATGVVGGMITATVLAVFFV
PLFYVVVVKLFEGRKKPHAVAEAEGETA
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgttttttcattgaccggccgatcttcgcctgggtgctggcgatcgtcgccatg
ctcgccggcgcgttgtcgctggtgaaaatgccgatcagccagtacccgaacatcgccgcc
ccggcggtggccatccaggtcagctaccccggcgcctccgcgcagaccgtgcaggacacc
gtggtgcaggtcatcgagcagcagctcagcggcctcgacggcttccgctacatgtccgcg
gagagcaattccgacggcagcatgaccatcatcgtgaccttcgagcagggcaccaacccg
gacatcgcccaggtgcaggtgcagaacaaactgcagctggccaccccgcgtctgcctgaa
gaagtgcagcgccagggcctgcgcgtggtgaagtaccagaagaacttcttcctgatcatc
ggtctggccgataccaccggcaagatgaccaacttcgacctcggcaacctgatcgcctcg
cagctgcaggacccgatttcgcgcatcgacggtgtcggcgactacctgctgttcggctcg
ccttacgccatgcgcatctggctcgatccggccaagctcaacagctaccagctgacgcct
ggcgacgtcgccaatgccatccgcgaacagaacgtgcaggtgtcctccgggcagctcggc
ggtctgccgacgctcagcggcgtgcagctcaacgccacggtgctgggcaagacgcgcatg
accacgcccgaggagttcgaggaaatcctggtcaaggtcaaggccgacggctcacaggtg
cgcgtcaaggacatcgcccgcgtcgagctgggtgccgacaacttctccatttccagcaag
cgcaacggcgaaccctcggcgggcctggcgctgcgcctggcttccggcggcaacctgctg
gagaccgtggccgcggtgaaggccgcgatggaaaaacagaaagcctacctgcccgaaggc
gtcgaggtggtctatccctacgacaccacgccggtggtggaggcctcgatcagttcggtg
gtgcacaccatcatcgaggcggtggtgctggtcttcctggtgatgtacctgttcctgcag
aacttccgcgccacgctgattccgaccctcgcggtgccggtcgtgctgctcggcgccttc
gcgctgctgccgtacttcggtctgagcatcaacgtgctgaccatgtacgcgatggtgctg
gccatcggtctgctggtggacgatgccatcgtggtggtggagaacgtcgagcgcctgatg
cacgaggagggcctgtcgccgctggaagccacgcgcaagtcgatggggcagatccagggt
gcgctggtcggcatcggcctggtgctgtcggcggtgttcgtgccgatggccttcttcggc
ggttcggcggggatcatctacaagcagttcgccgtgaccatcgtgctttgcatgggcctg
tcggtgctggtcgcgctgatcttcaccccggcgctgtgcgccaccatcctgaagaagccc
aaaggcgacgcccaccacgagaagaagggcttcttcggctggttcaaccgcaccttcgag
cgcggcaccacccgtttcgagcgcggcgtcggtggcatgctcaagcaccgcgggcgctac
ctgctggccttcgtgctgatcactgccggcaccggctacctgttcacccagattcccaag
gccttcctgcccaacgaggaccagggcctgatgatggtggaagtgcgcatgccggttaac
tcctccgcagagcgcaccggtgcggtacttcagcaggtgcaggactatctgaaggaagag
gaaggcgagctgatccagcacgtgctgaccgtcaacggcttcaacttcgccggtcgtggg
cagaactccggcctcggtctggtcatgctcaagggctgggaccagcgcgccgcggagggt
caggacgtgttcagcatcgccgagcgcgccaacgcccatttcgcgacgatcaaggacgcc
accgtgatggccttcgtgccgccggcgatcctggaaatgggtaacgcgatgggtttcaac
ctctatctgcaggacaacgctggcgtcggtcatgcggcattgatggaggcgcgcaaccag
ttcctgcaactggccggcgagcatccgaagctgcgcgcggtgcgccccaacggcaaggac
gacgagccgcagttccaggtcaacatcgacgatgagaaggcccgtgcgctgcaggtcagc
atcgcgtcgatcaaccagaccatgtcggcggcctggggctcgatgtacgtcaacgacttc
atcgaccgcggccgggtcaagcgcgtgtatatccagggcgaggagaccgcgcgcatcacg
ccggaggatttcgacaagtggtacgtgcgcaacgccctcggtgagatggtgccgttctcg
gccttcgccaccggcgaatggaccttcggctcgcccaagctggagcgctacggcggcatc
tcctcggtggaaatcctcggcgaaccggcaccgggctacagcaccggcgacgccatggtg
gccatcgctgaaatcatgcagcaactgccgccggggatcggcctgagctacaccgggctt
tcctacgaggaaatccagaccggtgaccaggcgccgatgctctacgcgctgaccgtgctg
atcgtgttcctctgcctggcggcgctctacgagagctggtcggtgccggcggcggtgatg
ctggtggtgccgctgggcatcctcggctcggtgctcgccacgctgttccgggatctcacc
gccgacgtctatttccagatcggcctgatgaccacggtcggcctgtcggcgaagaacgcc
atcctcatcgtcgagttcgccaaggacctttatgagaaggaaggcatgccgctggtccag
gcggcggtgcacgcggcgcgtctgcgcctgcgccccatcgtcatgacctcgctggcgttc
accttcggcgtgctgccaatggccctggccagtggcgccggcgccggcagccagcattcg
gtggcgaccggggtggtcggcgggatgattaccgccaccgtgcttgcggtgttcttcgtg
ccgctgttctacgtggtggtggtcaagctcttcgagggccgcaagaagccgcacgccgtt
gccgaagccgaaggagaaaccgcatga
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