Shewanella decolorationis: D0436_07855
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Entry
D0436_07855 CDS
T09167
Symbol
rfbG
Name
(GenBank) CDP-glucose 4,6-dehydratase
KO
K01709
CDP-glucose 4,6-dehydratase [EC:
4.2.1.45
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00520
Amino sugar and nucleotide sugar metabolism
sdeo00541
O-Antigen nucleotide sugar biosynthesis
sdeo01100
Metabolic pathways
sdeo01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
D0436_07855 (rfbG)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
D0436_07855 (rfbG)
Enzymes [BR:
sdeo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.45 CDP-glucose 4,6-dehydratase
D0436_07855 (rfbG)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Motif
Other DBs
NCBI-ProteinID:
QDZ90392
UniProt:
A0A5B8QWE2
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Position
complement(3392855..3393925)
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AA seq
356 aa
AA seq
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MVNPDFWRNKRVFVTGHTGFKGSWLSIWLHLMGAKVKGYALSPPTTPSLYNEAKVGTLIE
SEIGDIRDFEQLKSSMLAFEPEILIHMAAQPLVRLSYREPLETYDVNVMGTVKVLEAAKG
CKYLKSIVSVTTDKCYENKEWEWGYREDEPMGGFDPYSSSKGCAELVTSAYRRSFMQDKG
IGLASARAGNVIGGGDWADDRLIPDILRAFERNEAVVIRNPKSTRPWQHVLEPLSGYLVL
AQKLYEEPTKYAEGWNFGPFEGDAKPVDWILGKMVALWPNSAWKLDNDAHPHEAGYLKLD
VSKAKRHLGWGPTWRLEQTLTRIILWQQAWLNNQDMQKACAEEINDYMRDMNNADN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggttaatccagacttttggcgcaataaacgcgtatttgtcactggccacacaggcttc
aagggcagttggttatctatttggctgcatctgatgggggcaaaagtcaaaggctatgca
ctgtcgccaccaacaacaccaagcttgtataatgaagccaaagttggaaccttgattgaa
tctgagattggcgatatacgtgattttgaacaattaaagtccagcatgttggcatttgag
cctgagatactgatccatatggctgctcagccattagttcgtttgtcttatagagagcct
ttggagacctatgatgtcaatgttatgggtactgttaaggtgctagaagctgcgaaaggc
tgtaagtatcttaaatctatagttagcgtaaccacagataaatgttatgagaacaaagag
tgggagtggggctatagggaagatgaacctatgggtggttttgatccatacagcagttct
aaaggctgtgctgaattggtgacatccgcttaccgacgttcttttatgcaagataaaggc
attggcttagcgtctgctcgtgctggtaatgtgattggtggcggcgattgggcagatgat
cgcctgatccctgacattttgcgtgcatttgagcgcaatgaggctgtggtgattcgcaac
cctaagtcgaccagaccatggcaacacgttttagaaccactgtcaggctatctggtttta
gcacagaaactgtatgaagaaccaactaagtatgctgaaggctggaactttggtccgttc
gagggggatgctaaaccggtagattggattttaggtaaaatggtagcgctttggccaaac
tccgcatggaagcttgataacgacgctcatccacatgaagcaggctatttaaagttagat
gtgtcaaaagccaaaaggcatttgggatggggccctacctggcgtttggaacagacattg
acgcgaataatattgtggcaacaggcatggttgaataatcaagatatgcaaaaagcctgt
gcagaagaaataaacgactatatgagagatatgaataatgcagacaactga
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