Shewanella decolorationis: D0436_07975
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Entry
D0436_07975 CDS
T09167
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo00521
Streptomycin biosynthesis
sdeo00523
Polyketide sugar unit biosynthesis
sdeo00541
O-Antigen nucleotide sugar biosynthesis
sdeo01100
Metabolic pathways
sdeo01110
Biosynthesis of secondary metabolites
sdeo01250
Biosynthesis of nucleotide sugars
Module
sdeo_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
D0436_07975 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D0436_07975 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D0436_07975 (rfbC)
Enzymes [BR:
sdeo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
D0436_07975 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QDZ90414
UniProt:
A0A5B8QVB9
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Position
complement(3367373..3367915)
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AA seq
180 aa
AA seq
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MKCVETELAEVLIFEPKVFGDERGFFMETFRQAYFTECLLSRGFEASALVQDNYSRSQQH
VLRGLHYQQQYPQGKLVRVCAGSIFDVAVDIRPQSVTYGKWVGRILSADNHLQMWIPPGF
AHGFYVLSEYADVLYRCSDYYAPDDEYVLAWNSAEFAIEWPLLNNTPILSARDANAAVSV
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcgttgaaaccgagctggctgaagtacttatctttgaacctaaggtatttggc
gatgagcgaggcttttttatggaaacctttcggcaagcgtattttactgagtgcttgctg
agtcgcggatttgaagcgtcagcgttagtgcaagataactatagtcgctcgcagcagcat
gtattgcgtggattgcattaccagcaacaatatccgcagggcaaattagtccgagtgtgt
gctggcagtatttttgatgttgccgtcgatattcggccacaatccgtgacctatggcaaa
tgggttggcaggattctttctgcagataaccatttgcaaatgtggatccccccaggtttt
gcccacgggttttatgtgttaagtgagtatgctgatgtgttgtatcgttgcagcgattat
tatgcgccggatgatgaatatgtacttgcttggaatagtgccgagtttgcgattgagtgg
ccactgttaaacaacacacccattctttccgcaagagatgccaatgccgccgttagcgtc
taa
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