Sphingomonas daechungensis: H9L15_11950
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Entry
H9L15_11950 CDS
T07072
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sdh
Sphingomonas daechungensis
Pathway
sdh00521
Streptomycin biosynthesis
sdh00523
Polyketide sugar unit biosynthesis
sdh00541
O-Antigen nucleotide sugar biosynthesis
sdh01100
Metabolic pathways
sdh01110
Biosynthesis of secondary metabolites
sdh01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sdh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
H9L15_11950 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
H9L15_11950 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
H9L15_11950 (rfbC)
Enzymes [BR:
sdh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
H9L15_11950 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QNP42792
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Position
complement(2224513..2225079)
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AA seq
188 aa
AA seq
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MEFRTFDIEGPLEVVPRKIEDDRGYFSEIFRLGSFVECVGPVEFVQDNQSLSVRRGTLRG
IHFQSHPMAQGKLVRCLAGSVLDVAVDLRGDSPTYGRWVSTTLTPEENNQLWIPVGFGHA
FCTLQPNSVIGYRVTNYYSPENDKGVAWDDPEIAVEWPDLVDPSTLSAKDQTQPRLADLP
EYFSMEGK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcgtaccttcgacatcgagggaccactggaagtcgtcccgcgcaagatcgaa
gacgaccggggctacttttcggaaatcttccggttggggtcctttgtcgaatgtgtcggt
cccgtcgaattcgtccaggacaaccaatccctgagcgtgcggcgaggcacccttcgaggc
atccatttccagtcacatccgatggctcagggaaagctcgtccgctgcctcgccgggtcg
gttctcgatgtcgccgtcgacctgcgaggtgactctccgacttacggacgctgggtctcg
acgaccctcacgccagaggagaacaaccagctctggatccccgttggcttcgggcatgcc
ttctgcacgctccagccgaattctgtgatcgggtatcgcgtaaccaattattacagcccc
gagaacgataagggcgtggcgtgggacgatcccgagatcgccgttgagtggcccgatctg
gttgacccgtcgacattgtcggcgaaggaccaaacgcagccacgcctggcggatctgccg
gagtacttttcgatggaaggcaagtga
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