Sphingobacterium daejeonense: NCTC13534_05024
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Entry
NCTC13534_05024 CDS
T06632
Name
(GenBank) Outer membrane cobalamin receptor protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
sdj
Sphingobacterium daejeonense
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdj02000
]
NCTC13534_05024
Transporters [BR:
sdj02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC13534_05024
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
CarbopepD_reg_2
Plug
CarboxypepD_reg
CooC_C
Motif
Other DBs
NCBI-ProteinID:
VTQ06384
LinkDB
All DBs
Position
1:4176416..4179622
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AA seq
1068 aa
AA seq
DB search
MKLNFTLLQKGVRQLKPKVSWSLLLSIFMASSQQINAYEINFGATEILSNSVQETIKGRV
VDEEGNPITSATIQLKGTNIGTKSDAEGNFELASVPANSVLQVSSVGFATKDVALQGNGF
LEITLQSSSTDVEEVVVVGFGTQRKENLTGAVSSIQMSDVVGSRPITSLSSGLAGQAPGL
SVTQGSGRPGADGGSLRVRGQGTLNNANPLVVIDGVVGDMNLINPQDVESISVLKDAASA
SIYGSRAANGVILITTKKGRNNDFKVIYNNYFSSQKPSNVMTMISNYADYMELVNEGYKN
GDANAKPIFSQENIDLWRANENGDQLMYPNTDWVESLFQNKISQNHNLSFTGGSEKIKFF
GSYGLLDNPGIVEQATYKRHTGRINLEADIKPWLTLGTNINGVVSKTMIGTNLINDVFLY
AAASTPGMVLRAPDGRFGSPNNPEDDPQSNNILHRLYAQKGDINKNRFVSRFFAKLRPIK
GLSIEGSYTYTYNDDFIYSQPVFNDRWNFLTNSVATAGTGRSSVTNQSVKTYRYYMDGIA
KYENTAADSRLKYEVMVGASQEYLKDGWFAASKLDLIDPSLSVLNAATMDASASGNTTDW
AMRSFFGRLNLSWDDKYLLEANLRTDGSSRFMSGKSRWGTFPSASVGWKISSEDFYDVSW
MPTLKLRASYGSLGNNGTVDDVFFYNGGINNYEYQTLYSSANYILNNQLFVGFAQTGLSN
SLLTWESTNVLNLGLDFDLSNYKLSGSVDVFDKTTNNILINLPAPMVVGDASIPRTNAAK
VRNRGIETNLTYRDKIGENFNFNVSGNFTFIDNKVIKFKGDDRSISGANLLQEGYAINTQ
FILLHDRIIQTDADLQLVEDMIKNAPVDPETNQQLNPFAAYGKPEKGDLLYVDTNNDGVI
NDEDRVAVGHGTAPRITYGFNLGFDYRGFDFNVFLQGSAGNKLVYTDLHYTPTVRWGYQL
NQEIVDGRWTEGRTDATYPRLLPYTNTRNNINSDFWLQNKSYMRIKNIQLGYTFPNELTQ
KIAVQNLRVFGSMENYWTFTKYKGFDPEVNGTNYPTMKQIVFGIGLTF
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaatttcactcttttgcaaaagggagttcggcagctcaagcctaaagtgagc
tggtccctgctgctatcgattttcatggctagttcccagcaaattaacgcctatgaaatt
aattttggtgcaaccgaaattctttccaacagtgttcaagaaactatcaaaggaagggtt
gtggatgaagaaggaaatccgataacatcagcaaccatccagttaaaaggaaccaatatt
ggcacaaaatcagatgctgaaggtaattttgaattagcgagcgttccagccaactccgta
cttcaagttagttcggtgggatttgctacaaaagatgttgctttacagggcaatggtttt
ttagagattactttacagagctcctcgacagatgttgaagaagttgtagtagtcggattc
ggtactcaacgtaaagaaaacctaaccggtgccgtgtcatctattcaaatgtcagacgtt
gttggcagtagaccaattacatctttatcatctggtttagctggtcaggctccaggatta
tcggttactcaaggatcaggtcgaccaggagcggatggtggatctctacgggttcgtggt
caaggaacgttgaacaatgcaaacccattagttgtaatcgatggagttgttggcgacatg
aacctgatcaatcctcaagatgtagaaagcatctccgttttgaaggatgctgcatcagcg
tcgatctatggatccagagctgcaaatggtgttatcttgattactactaagaaaggaaga
aataatgatttcaaagtaatttataacaattacttctcttctcagaagccttccaatgtc
atgacgatgatttccaactatgctgattatatggagttggtgaacgaaggctacaaaaat
ggtgacgcaaacgcaaagcctatcttttcccaagaaaacattgatctgtggcgagccaat
gaaaatggagatcaattaatgtatccaaatactgattgggtagaatcattgtttcagaac
aaaatatcacaaaaccacaatttatcctttactggaggaagcgaaaaaatcaaattcttc
ggctcttacgggttattggataatcctggtattgttgaacaagctacatataaaagacat
acggggaggataaatctcgaggctgacataaaaccttggctgacattgggaaccaatatc
aacggagtcgtttccaaaaccatgattggtactaacctcatcaatgatgtctttttatat
gctgctgcgagcacgcctgggatggtattaagggctcctgatggtagatttggttcacca
aacaatccagaagatgatccacaatcaaataacatattacatcgtttatacgctcaaaaa
ggggatataaacaaaaataggtttgtcagcagattctttgctaaattgagacctatcaaa
ggtttgagcatagaaggatcttatacttatacctataatgatgactttatatatagccaa
cctgttttcaatgaccgttggaacttcttgactaattccgttgcaacagctggaactgga
agaagttcagtgaccaatcaatctgtcaagacttaccgttattacatggatggtattgcc
aaatatgaaaatactgcagcagatagccgtctgaaatacgaagttatggttggtgccagt
caggaatatttaaaagatggttggtttgctgcatcaaaattagatttgatagatccatca
ttaagtgtattgaatgctgcaacaatggatgcttcagcatcagggaacaccacagactgg
gctatgcgttcattttttggtcgtttaaacctctcctgggacgacaaatatttattggaa
gcaaacctgaggacagatggttcatcaaggtttatgagtggcaaaagcagatggggaact
tttccatcagcatcggtgggctggaaaatatcatctgaagacttctacgatgtaagctgg
atgcctacgcttaaattgagggcctcttatggatccttaggaaataatgggaccgttgat
gatgtgtttttttacaacggcggaatcaacaactacgaatatcaaaccttatatagttca
gcgaactacatcctgaacaaccaattatttgtaggatttgctcaaaccggtttaagcaat
agtctattgacttgggagagcacaaatgtgctaaacttagggttggattttgatttatcg
aactataaattgagtgggtctgtggatgtatttgataaaaccacaaacaatatcctgatc
aatttacctgctcctatggtagttggagatgcatcaattccaagaacaaatgcagcaaaa
gttagaaacagaggtatagaaaccaatttgacctatcgtgataaaatcggtgagaacttt
aactttaacgttagtggaaacttcacttttattgacaacaaagtcatcaaattcaaaggt
gatgatcgttctatttcaggcgccaacttacttcaagaaggttatgccattaacacccaa
tttatcttgcttcatgacaggatcatccaaacggatgctgatttacagttggtggaggac
atgatcaaaaacgcaccggtggatccagaaactaatcaacagttaaatccatttgcagct
tacggtaagcctgaaaaaggtgatttgctatatgttgacaccaataatgacggcgtaatc
aatgatgaggacagagtcgctgtaggtcatggtactgctccgagaattacttacggtttc
aatttgggatttgattacagaggttttgacttcaatgtatttttacaaggaagtgctgga
aataaattagtgtatacagatttacattatactccaaccgttcgatggggttaccagttg
aatcaagagattgtggatggacgatggacagaaggcagaacggatgctacctatccaaga
ctattaccatataccaacacccgaaacaacatcaacagtgatttttggttacaaaacaaa
tcttatatgcgtatcaaaaacattcaattaggttatacttttcctaatgaattaacgcaa
aagattgctgttcaaaatttacgtgtatttggttcaatggagaactactggacatttaca
aaatacaaaggatttgaccccgaagtaaatggaaccaattatccgaccatgaaacaaata
gtgtttggaataggattaaccttctaa
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