Sphingobacterium daejeonense: NCTC13534_05302
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Entry
NCTC13534_05302 CDS
T06632
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj00521
Streptomycin biosynthesis
sdj00523
Polyketide sugar unit biosynthesis
sdj00541
O-Antigen nucleotide sugar biosynthesis
sdj01100
Metabolic pathways
sdj01110
Biosynthesis of secondary metabolites
sdj01250
Biosynthesis of nucleotide sugars
Module
sdj_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NCTC13534_05302 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NCTC13534_05302 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NCTC13534_05302 (rfbC)
Enzymes [BR:
sdj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NCTC13534_05302 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
BLM10_mid
Motif
Other DBs
NCBI-ProteinID:
VTQ07485
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All DBs
Position
1:complement(4434072..4434638)
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AA seq
188 aa
AA seq
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MNAIETGLKDCFILEPRVFGDSRGYFFESYNKSVFKKAIGLDVDFVQDNQSFSTKAVLRG
LHAQAGEFAQAKLVRVLQGEVLDVAVDARPDSNTFGKHVAVLLSAENKRQLFVPRGFLHG
FIVLSETAEFSYKCDNLYNKDAEWGVIYNDSQLNIDWSLPTDNLLVSDKDRLLPSFEDAI
AQLKLKTN
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaatagaaactggtcttaaggactgtttcattttagagcctcgagtatttggt
gatagcagaggctatttttttgagagttacaataagtctgtttttaagaaagctattggt
ttggacgtggattttgttcaggataaccaaagtttctcgaccaaagctgtattgcgtggt
ctgcatgcacaggctggtgaatttgcacaggctaagttggtgcgagtattacaaggtgag
gtgctggatgttgctgttgatgctagaccggactcaaacacatttggtaagcatgttgca
gtcctgttaagcgctgaaaacaaacgacaactttttgtgccaagaggatttttgcacggt
tttattgtattatccgaaactgctgagttttcttataaatgcgataacctttacaataaa
gacgcggaatggggtgtgatctacaacgacagtcaactgaatattgactggtcattgcca
actgacaacctcttggtatctgacaaagacaggttattgccgtcctttgaggatgctatt
gctcaattaaagctaaagactaactaa
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