Shewanella dokdonensis: KHX94_05135
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Entry
KHX94_05135 CDS
T07469
Name
(GenBank) glycoside hydrolase family 27 protein
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00052
Galactose metabolism
sdk00561
Glycerolipid metabolism
sdk00600
Sphingolipid metabolism
sdk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
KHX94_05135
09103 Lipid metabolism
00561 Glycerolipid metabolism
KHX94_05135
00600 Sphingolipid metabolism
KHX94_05135
Enzymes [BR:
sdk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
KHX94_05135
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Melibiase_2
Melibiase_C
Melibiase_2_C
Melibiase
Raffinose_syn
Motif
Other DBs
NCBI-ProteinID:
QVK24012
LinkDB
All DBs
Position
complement(1073139..1074680)
Genome browser
AA seq
513 aa
AA seq
DB search
MSVFQWKQASALLCLLPLLLLGSCGDAQPKTPPLVGVWLFDDTVPDFPGVRMIEIYASGK
GYQGTMTTRWYGPMPMKQLKITGDSATFEIFNGNARVPATTWRARLLQGKLHVNGEVWYG
KLDHDAVRGTAADVEARHFTLTSLPEYAELPPDGLALTPPMGWSSWNKFAEHIDDKTVRE
IADAMVSSGLRDAGYVYVNIDDGWQGTRAADGSIQANERFPDMKALADYVHSKGLKLGIY
SSPGPKTCAGYEGSYGHVAQDAQTYASWGIDYLKYDLCSGEAFYQTGAQIRASYQEMGQA
LRATGRAIVYSLCEYGRADVGSWGRSVGGHLWRTTGDITDEYEVMARLGFELNGKPQHAG
AGGWNDPDMLEVGNGGMTHDEYQTYMTLWAMSAAPLLMGHDVRHMSAATVALLENPEVIA
IDQDVLGAQGQSVRKDGDSEIWRKPLADGSVAVALFNRGAQSKTMTLTVADSGLSAWQSG
RDLWQQQEVILQPQLTFTVAAHGSQLLRLQGQQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtatttcaatggaagcaagctagcgcactgttatgcttgctgccgctgttgttg
ctgggcagttgtggtgatgctcaaccgaaaactccgccgttagtgggcgtatggttgttt
gatgacacagttccagattttcccggtgtgcgcatgatagagatctatgccagtggcaag
ggttatcagggcacaatgacaacccgttggtacgggcctatgccgatgaagcaactaaaa
atcaccggtgatagtgcgacgtttgagattttcaacggcaatgctagggttcccgcgacc
acttggcgggcacggttgttacagggcaagctacatgttaacggcgaggtctggtatggc
aaactggatcatgatgcggtgcgcggcactgcggcggatgtcgaggcgcgacacttcact
ctgacatccctgccggaatatgccgagctgccgccagatgggctggcattgacgccgcct
atgggctggagtagctggaataagtttgctgagcatattgacgataaaaccgtgcgcgaa
attgcggatgcaatggtgagttctggcctacgcgatgcgggctatgtgtatgtcaatatt
gatgatggctggcagggcacccgggcagccgatggctcgattcaggccaacgagcgcttc
ccagacatgaaagccttggccgattatgtgcacagcaaaggcttaaagctggggatctac
agttcgccggggccgaaaacctgtgctggctacgaaggcagttacgggcatgtggctcag
gatgcgcaaacctatgcgagctggggaattgactatctgaagtacgatttgtgttctggt
gaagccttttatcagaccggagcccagatccgggccagttatcaggagatgggtcaggct
ttgcgggccactggccgtgctattgtctacagcctctgtgagtatggccgcgccgatgtt
ggcagttgggggcgcagtgtcggcggccacttatggcgcactactggcgatattactgat
gagtatgaggtcatggcgcgtcttggttttgagcttaatggtaagccacaacatgccgga
gcgggcggttggaatgacccggatatgctggaagttggtaacggtggtatgacccatgat
gaatatcagacttatatgaccttatgggcgatgtctgccgcgccattgctcatggggcat
gatgtgcgacacatgtctgcggcaacggtggcattactggagaatcccgaggtgatcgct
atcgatcaagatgtgctgggtgctcaggggcagtcagtgcgtaaagacggcgatagcgaa
atctggcgcaagccactagcggatggcagtgttgctgtggcgttattcaatcgcggtgct
cagagcaaaaccatgacgttaaccgttgccgacagtggcttgagtgcttggcaaagcgga
cgtgacttatggcaacagcaggaggttatccttcagccccaactcacatttaccgttgcc
gcgcatggtagccaattgctacggttacagggccagcaatag
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