Shewanella dokdonensis: KHX94_06910
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Entry
KHX94_06910 CDS
T07469
Name
(GenBank) DUF4981 domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00052
Galactose metabolism
sdk00511
Other glycan degradation
sdk00600
Sphingolipid metabolism
sdk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
KHX94_06910
09103 Lipid metabolism
00600 Sphingolipid metabolism
KHX94_06910
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
KHX94_06910
Enzymes [BR:
sdk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
KHX94_06910
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
BetaGal_gal-bd
Transglut_C
Motif
Other DBs
NCBI-ProteinID:
QVK24268
LinkDB
All DBs
Position
complement(1432601..1435720)
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AA seq
1039 aa
AA seq
DB search
MANISWLALALWLLVACQQNPASSHHDWEDPAVFDINKLPDRAYFISYPSAPLALAQQPQ
TSSQYYSLNGQWHFHFAKRPAERPEAFYKNDFDVSSWPLITVPSNWQMQGYDYPIYTSAG
YPFPMNKPYIDPSYNPVGSYRRDFTVPTDWLQQRLVLHFGAVKSAFYVWINGKKLGYSQD
SKLPAEFDITDYVKPGNNSLAVEVYRWSDGSYLEDQDFWRMSGIQRDVFIQVSPKAQLWD
FSAKAVLQNAYQDGQLTLALQLQNSSKQAAQLSVDTAVYDGDKPLWQQQNSLEVAAGKTV
PLTLQHRFPKIQPWSAEVPKLYRLLLTVKQPGAEDQVIYQPIGFRSVELQHGQLLVNGQP
IIIKGVNRHEHDPVTGQTISQASMLNDIRLMKLNNINTVRTSHYPNDPYWYQLCDQYGLY
VIDEANVESHGYGFDEHGIGNDPQFKAAIWDRMHGMIERDKNHPSIISWSLGNETGPGPN
LSASYQLAKAMDDSRVVQFESRTTWFKEKMTDVIGWMYANREEITDKYLGKYPEQPFIWV
EYAHAMGNSSGNLKELWDFVYAHPQVQGGSIWDWVDQGLLKHTTDGRSYFAYGGDFEPQG
MANDGNFCANGLLAADRSPHPALHEVKKIYQPLAVTRLSNSQYRITNRNFFKNLSDLNGA
WQLLADGKLLAQGELPRLTTAPQQTSDITIAALQHFPFATDKEYALNFRFVSREAEDLPA
GHEVASEQFLLQPLAAKVFKLAAAKDLQVAEDNDNVTVGAGRSQLRFDKHSARLVSYRVA
GVELVKQGLFPNFWRALTDNDYGNKFAKETAEFYKQADTAAQVTGVQLRQQAGFAQVQFT
LHFPTLHSDGSIVYRIGRDGAVAVDYQANLAKDLPEMPRFGLKMQLPEGFDSVAWYGRGP
WENYQDRKESAYLGLYHADVSELYTPYIRPQENGNRSDTRWLEIRNQQGIGLRISGAPQF
DFTAHHNTIADFDYPKDGPNRHTTDIVPRAMTELCLDLRQRGVGGDTSWGALPYDAYRLL
PAKQQTYRLQLLLQPLTVQ
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacataagctggttggcactggcgctgtggttattggttgcctgccagcaaaac
cccgccagcagccatcacgactgggaagatccggcagtctttgatattaataaattgcca
gatcgtgcttattttatctcttatccctcagcgccactggcgttggcacaacagccgcaa
acatctagccaatattactccctcaatggtcaatggcatttccattttgctaaacggcca
gctgagcgcccagaagctttttataaaaacgattttgatgtttcaagctggccgttaatc
actgtgccgtctaactggcagatgcagggctatgactatccgatctacacctctgctggc
tatccgttcccgatgaataagccgtacatagatccctcatacaatccggtgggctcttat
cggcgggattttacggtgccaacagactggttacagcagcgtttggtgttgcattttggc
gcggtcaaatcggctttttatgtgtggatcaatggtaaaaagctaggctacagccaggac
agcaaactgccggcagaatttgatatcactgactatgttaagcctggcaacaatagtttg
gcggtagaagtttatcgctggagcgatggcagttatctggaagaccaggatttctggcgc
atgagcggcattcagcgggatgtgtttatccaagtatcacccaaagcgcagttgtgggat
ttcagcgccaaagccgtactgcaaaatgcttatcaagatggtcaattaaccttggcgttg
cagttgcagaacagcagcaagcaagccgcgcagctcagcgttgatactgctgtgtatgac
ggtgataagcccttgtggcagcagcaaaactcgcttgaggtggccgccggtaaaaccgtg
ccgctaacgttgcaacatcgttttccaaagatccagccgtggtcggcggaagtgccgaaa
ctctatcggttactgctcacagtgaaacaaccgggcgcggaagatcaggtgatctatcag
cctatcggttttcgtagtgtcgagttgcaacatgggcaactgctggtaaacggccagccg
attatcattaaaggcgttaatcggcatgagcatgatcctgtgacgggtcagaccatctct
caggccagcatgctcaacgatatccgtttgatgaaactgaataatatcaatacggtacgg
acgtcacattaccccaatgatccctactggtatcaactgtgcgatcaatacggcttatac
gtgattgatgaagccaatgtggaatctcacggttatggctttgatgaacacggtataggt
aacgatccgcagttcaaagccgccatttgggatcggatgcacggcatgatcgagcgcgat
aaaaaccatccgtcgattatttcttggtcgttgggcaatgaaactggcccggggccgaat
ctgtctgcttcttaccagttggccaaagccatggatgacagccgggtggtgcaatttgaa
agccgtactacctggttcaaagagaagatgactgatgtgattggctggatgtatgccaat
cgtgaggaaattactgacaagtacctggggaaatatccagagcagccatttatctgggtg
gagtatgcccatgcaatgggtaacagtagcggcaatctcaaggagttatgggattttgtg
tatgcccatccgcaagtgcagggcggcagtatctgggattgggtcgatcaggggttactg
aaacatactacggatggtcgcagttacttcgcctatggcggcgattttgagccgcaaggt
atggctaacgatggtaacttttgtgctaatggcttgctggcggcagatcgctcgccgcat
ccagccttgcacgaagtgaaaaagatctaccagccgttggcagtcactcgcctaagtaac
agtcaataccgcataactaaccgtaatttcttcaaaaatctgagcgatcttaacggagcg
tggcagttgctagcagatggcaaactgcttgcgcaaggcgaactcccgcgactaaccacg
gcgccgcaacagacatccgatattacgattgccgcattgcagcatttcccgtttgccacc
gataaagaatacgcactcaacttccgttttgttagccgtgaagcggaggatttgcctgcc
gggcacgaggttgccagtgagcagttcctgctacaaccgctggcagctaaagtgtttaaa
ctggcagcggctaaagatctacaggttgcagaggataacgataacgtcactgttggtgcc
ggacgcagtcagctacggtttgataagcacagcgctcgtttagtgagttatcgcgtcgct
ggggtggaattggtaaaacaaggtttgttccccaatttctggcgagcactgaccgataac
gattatggcaacaaattcgctaaggagacggcggaattctacaaacaggctgacactgcg
gcgcaggtaactggggtacaactgcgtcagcaagcagggtttgcacaggtacagttcacc
ttacatttcccaacactgcacagcgatggcagcattgtttaccgcatcggccgagatggt
gcggtagcggtggattatcaagccaatctggcaaaagacttaccggaaatgccacgattc
gggctgaaaatgcagctaccggagggttttgatagcgttgcctggtatggccgtggcccg
tgggaaaactatcaagatcggaaagagagcgcttatcttgggctctaccatgcggatgtc
agcgaactctacacaccctatattcgaccacaggaaaatggtaatcgcagtgatacccgt
tggttagagatccgtaatcagcagggcattggactgcgcatcagcggcgcgccgcagttt
gattttaccgcgcaccacaacaccattgctgattttgattacccgaaagatggcccgaac
cgtcacaccactgatattgtgcctagagctatgacagaactgtgtctggatctacggcag
cgtggtgttgggggcgataccagctggggcgcattgccttatgacgcctaccgtctatta
ccggctaagcagcaaacgtatcggttgcagttactgctgcaaccactgacagtccaatag
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