Shewanella dokdonensis: KHX94_08605
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Entry
KHX94_08605 CDS
T07469
Name
(GenBank) DNA-3-methyladenine glycosylase I
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KHX94_08605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdk03400
]
KHX94_08605
Enzymes [BR:
sdk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
KHX94_08605
DNA repair and recombination proteins [BR:
sdk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KHX94_08605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QVK24499
LinkDB
All DBs
Position
complement(1785920..1786492)
Genome browser
AA seq
190 aa
AA seq
DB search
MEKQRCGWVSTDPLYQQYHDEVWGRPVYDSQQLFAKLCLDGQQAGLSWITILRKQANYES
LFANFDPQIVALYDDSKVEELLQDPGIIRNRAKVNSIIKNAQAYLKFIEQGNDFSEFLWG
FVGGKPLNNRHACLADVPAQTAESEAMSKALKKLGFNFCGPTICYAFMQAVGMVNDHIVD
CFCYAELSHE
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacaacggtgtggctgggtttcgactgaccctttatatcagcaatatcatgat
gaggtgtggggccggccagtttacgatagccagcaattgtttgccaagttgtgcctcgat
ggacagcaggccggtttgtcttggattactattttgcgtaaacaggcaaactatgagtct
ttgtttgctaattttgatccccagattgttgccttgtatgacgatagtaaggtcgaggag
ttgttgcaggatccgggaataattcgcaatcgggccaaggttaactcaattattaaaaat
gcccaggcttatttgaaatttatcgaacaaggtaatgatttttctgaatttttatgggga
tttgttgggggtaaaccgttaaataatcgtcacgcttgtttagctgatgtccctgcgcaa
acggcagaatctgaagccatgtctaaggcacttaaaaaactggggtttaatttttgtggc
cccactatttgctacgcatttatgcaagccgttggtatggtaaacgaccatatagttgac
tgtttttgttatgcagaattaagtcatgaataa
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