KEGG   Stegodyphus dumicola: 118188490
Entry
118188490         CDS       T07385                                 
Name
(RefSeq) DNA ligase 3-like isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
sdm  Stegodyphus dumicola
Pathway
sdm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    118188490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdm03400]
    118188490
Enzymes [BR:sdm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     118188490
DNA repair and recombination proteins [BR:sdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     118188490
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C RNA_ligase BRCT_2 mRNA_cap_enzyme DUF3802
Other DBs
NCBI-GeneID: 118188490
NCBI-ProteinID: XP_035214811
LinkDB
Position
Unknown
AA seq 923 aa
MNVLSRIFRNIYGNLKCYNTILNDLATCKNCISVVSCVENFIMANNRYCVDLAKRGVAGC
KNCNVKIDKGLVRIAKIIPNPFTESGGDMKQWFHVRCIFEKLSRARATTKKIEGPDDLEG
WDQLSDEHREEVLKCLSEFSSNSTPKKNLKKTPTKSVEKSFDSPTIPDKPQSPSKDDTLR
EFRKVCSKIAEEPSYKNKTAILSDFFSKGSDGESFKGDLFLWVKLLLPNVGKRVYNLQSK
QLVKLFSEIFSVSYEEMLEDLEQGDVAETIKVFFESSKSFLPESKSTLTLQEVDSYLDQL
TRVSKEMEQSQILTKVAKRCTGNDLKMFIRFIKHDLRINAGPKPILDAINPSAYAAFQAL
SNLEDVIRRAIENNSGGSSQKQLTIESSLMTPVLPMLAMICKSVDEAFKRCPNGLYVEIK
YDGERIQVHKKGTEFSYFSRSLKPVMQHKVQHLKNYIPKAFPHGNNLILDAEILLVSNDG
KPLPFGTLGAHKKTAFKDASVCLFVFDCLQFNDENLMQKPLYQRRKLLEKNMTPVKNHIM
FSEIKEVTDPKVLKSLITSVKKQGLEGIVVKDKCGVYEPGKRHWLKIKKDYSEEAGMIDS
ADLVVLGAYYGTGQNGGLMSIFLMGCLNKLTGKWCTVTKARGFDDETLERLQTELDMIKI
SKDPSKVPSWLNVSSSLIPDFVSANPKKSPVWEITGDEFSKAEVHTANGISIRFPRVTRI
RNDKTWETATSLQELEEIYAASKETTDLIGLVTMKKNKSDDDDDDNDGTKNGTTYICDKS
SSSSSQTPSPKNGKNKRNCEVRSPSSKESISFVKKAKLNVYTKEPACKTVSEKEVLPNIF
TGVKLFIPQDLDKSDILRRYFIAYDGILLKENEKNEANYVILTPSLTESKALKNAKKVTE
DWIWDCIKLQKRLPADLYKPKAS
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgaatgtcctgtcaagaattttcagaaatatttatgggaacttgaagtgttacaataca
atactgaatgatcttgcaacctgtaaaaattgtatctccgttgtatcttgcgtagagaat
ttcatcatggccaacaatcgttattgtgtagatcttgcaaagcgtggggttgctggatgc
aaaaactgcaatgttaaaattgataaaggattagttcgaattgcaaaaataattcccaat
ccttttactgaaagtggaggagatatgaaacaatggtttcatgttcgatgcatatttgag
aagctttcaagagcacgggctacaacaaagaaaattgaaggtcctgatgatcttgaaggc
tgggatcagctcagtgatgaacacagagaagaggttttgaagtgcttatcagagttttct
tcaaattcaactcctaagaaaaatctaaagaaaacgcctacaaaatctgttgagaagtct
tttgactctcctactatccctgataagccacagagtccatcaaaagatgatactttaaga
gaatttcgaaaagtatgttcaaaaattgctgaagaaccaagttacaagaataaaactgcc
attttgtctgacttcttttctaaaggatctgatggtgaaagtttcaaaggagatttgttc
ttatgggttaagttgctgcttccaaatgttggcaagagagtttacaacttacaaagtaaa
caattggttaaactattcagtgagatatttagtgtatcatatgaagaaatgcttgaagat
ttagaacagggagatgttgctgaaacaatcaaagtttttttcgagtcttcaaagtctttt
ctacccgaaagcaaaagcactctcacattgcaagaagttgattcatatttagatcaactt
acaagagtttccaaagaaatggagcaatcccaaattttaaccaaagttgcaaaaaggtgt
acaggaaatgatttaaagatgtttattcgttttatcaaacatgatcttcggataaatgct
ggccctaaaccaattttggatgccattaatccttcagcatatgctgcttttcaagctttg
tctaatctggaagatgttataagacgtgctattgagaataacagtggtggaagctctcaa
aagcagttaactattgagtcatcgttaatgacacctgtgttaccgatgttggccatgatt
tgcaaatctgttgatgaagcttttaaaagatgtcctaatggattgtatgtggagatcaaa
tatgatggggaaagaattcaggttcataaaaaaggaacggaatttagttacttcagtcgt
agtttaaagcctgtaatgcaacataaggtgcagcatctgaagaattacataccaaaagct
tttcctcatggaaataatttaattcttgatgctgaaattttacttgtaagtaatgatggt
aaacccttaccttttggaactctgggtgcacacaagaaaactgcatttaaagatgcatct
gtctgcttatttgtttttgactgcttgcagtttaatgatgaaaatttaatgcaaaaaccc
ttgtaccaaagaaggaaattattagaaaaaaacatgacacctgtaaaaaaccatataatg
ttttcagaaataaaggaagttacagatcccaaagtactgaagtctcttattacatctgtt
aagaagcaaggcttagaagggattgttgtgaaagataaatgtggtgtttatgaacctggg
aaaagacactggttaaaaattaaaaaggattattcagaagaagctggcatgattgatagt
gctgatttggttgttctgggagcatactatggcactggacagaatggtggtctcatgtct
atatttttgatgggatgtctcaataaattgactggcaagtggtgtacagtaacaaaagct
cgaggttttgatgatgaaacacttgagaggttgcaaacagaactggatatgataaaaata
agcaaagatccatcaaaagttccttcgtggctgaatgtcagcagctccctcattccagat
tttgtatcagctaatcccaagaagtctccagtttgggaaataactggtgatgaattttcc
aaagcagaagttcatactgctaatggaatttctatccgcttccctcgagttacccgcata
aggaatgataaaacatgggaaactgcaactagtctacaagaactggaggaaatatatgct
gcatctaaagaaacaactgatttgattggtttggtgacgatgaagaagaataagagtgat
gatgatgatgatgataatgatggtacaaaaaatggaacgacttatatatgtgataaaagc
agtagttcttcaagtcagactccaagtcctaaaaatgggaaaaataagagaaattgtgaa
gtaagaagtccaagttctaaagaatctatttcatttgttaaaaaggcaaaattaaatgtg
tatactaaagagcctgcatgtaaaacagtatcagagaaggaagtgctgcctaatatattt
acaggagtcaaacttttcattccacaggatttggataaatcagacattctgcgacgttac
tttatagcatatgatggcatccttttaaaagaaaatgaaaagaatgaagctaattacgta
atattgacccccagcctaaccgaaagtaaagcattaaaaaatgccaagaaggttacggaa
gattggatttgggactgtataaagcttcaaaaacgacttcctgctgacttgtacaaacca
aaggcctcttga

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