Shewanella denitrificans: Sden_0553
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Entry
Sden_0553 CDS
T00344
Name
(GenBank) beta-N-acetylhexosaminidase
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00511
Other glycan degradation
sdn00520
Amino sugar and nucleotide sugar metabolism
sdn00600
Sphingolipid metabolism
sdn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
Sden_0553
09103 Lipid metabolism
00600 Sphingolipid metabolism
Sden_0553
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Sden_0553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sdn03110
]
Sden_0553
Enzymes [BR:
sdn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
Sden_0553
Chaperones and folding catalysts [BR:
sdn03110
]
Intramolecular chaperones
Others
Sden_0553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
CHB_HEX
CHB_HEX_C
Glyco_hydro_20b
Motif
Other DBs
NCBI-ProteinID:
ABE53843
UniProt:
Q12RT3
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All DBs
Position
complement(625836..628409)
Genome browser
AA seq
857 aa
AA seq
DB search
MATLKRLIPLAITLSSFNAFANFSQTELNEFAEKTSWSWQVIDNYHNGDKSHLANIELVN
QSRVDLPKGIADWVIYTNVIRPILTKKSQGLAFQFVQGDLYKITPTVNFKGLKAGDKLTI
PFEAENWASSHSDFMPRSFITQHSLTPAIFRSTDTEDSSKYIKPLNRPEQYQRYNTPRDH
WEKPTSAWRYDRYSPAQEYALTEDDAKRVIIPTPNKVKYSSSSTLLTADWQISYQGSLKS
EAHLLSETLDKKLKGSLKITPNNLPAQDKNLISLSIYNGDESWKPESYSLEIEKNRIEIV
GADSAGVFYAIQSLLSLTPSGTQSQIELPQLSANDAPHFEWRGFMYDMSRNFHGVEITKK
LIDQMAHYKLNKLHLHLTEDESWRIEIGGLPELTDLGSQRCFDLSETECMLPTRGSGPFK
TSQTNGFYSKEEFIDILKYAKQRHIEVIPEVDMPGHARAAIKAMELRHNKLIKSGDKTGA
NAYLLSDPLDKSVYSTAQFFNDNSINVCMDSTYNFVDKVAYEFQQMYREAGLKLTNIHIG
GDEVGVGSWTASPICNALYQAIDSGVKGPADLKAYFTRRAAEVLAARGLNIAAWEDGIMF
DRITPFPIEQFANNKVYVNAWDNIWEWGVSDRAYRLANEGYHAILSMGTHLYFDHPQEPD
PAERGLYWAARYTDVEKVFNFIPDNVYANADFTRAGEPIDNLEDLVGRALHQLNKPENIA
GIQGQVWSETIRTPEQLGEMIFPRIIALAERGWHRNTVLASEQQEQARQWAKFASVLALK
EYPKLEEAGVSFYLPIPGAKRIDNQVHIISQLPGLTLEYSLDNGENWQVYNKPIRLPDAI
KVRSRSGKHTSRVGSFE
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
gtggctactttaaaaagattaatccctttagctattacactttctagctttaacgcattc
gccaattttagccaaacagagttaaacgaatttgccgaaaaaacgagctggtcatggcaa
gtaattgataactatcataatggcgataaatcgcatctcgccaatattgagctagtcaac
caatctcgtgttgatttacctaaaggcatagctgactgggtgatctataccaatgttatt
cgcccaattctaacgaaaaagtcccaaggattggcatttcaatttgtacaaggagatctt
tataaaattaccccgacagtaaactttaaaggccttaaagctggtgataagcttactatt
ccctttgaagccgaaaactgggcatcttctcatagcgactttatgcctcgaagctttatc
actcaacactcacttaccccagcaatcttcagatctactgataccgaagatagcagcaaa
tacataaagccactcaatcggccagaacaataccaacgttataatacgcctagagatcac
tgggaaaagcccaccagcgcatggcgctatgaccgctatagccctgctcaagaatatgcg
cttacagaggatgatgccaagcgagtgatcatccctacccccaataaagtgaagtacagt
agctctagcactctattaactgctgattggcaaatatcttatcaaggaagcttaaaatca
gaagctcacttactatcagaaacattagataagaagctaaaaggttcgctaaagatcacc
ccaaacaatctgccagctcaagataaaaaccttatttcattatctatttataatggtgat
gaaagctggaagcctgagagttacagcttagaaattgaaaaaaatcgtattgaaattgtc
ggcgcagatagcgcaggtgtcttttatgctattcaaagtttattgagtctgacaccaagc
ggcacgcaatctcaaattgaattacctcaacttagcgccaacgatgctccacattttgaa
tggcgcggctttatgtacgatatgagccgtaatttccatggcgtggagatcaccaaaaaa
ctcatcgaccaaatggcgcattacaaactcaataagctacatcttcacttaactgaagat
gagtcttggcgaatagaaattggcggactaccagagctgacggatttaggtagccagcga
tgttttgacctatctgaaactgaatgtatgttgccaacaagaggctcggggccttttaaa
acgtcacaaacaaatggcttttacagcaaagaggagtttatcgatattctcaagtatgcc
aagcaaaggcatattgaagtcatcccagaggttgatatgccaggtcatgcccgcgcagca
atcaaggcgatggaacttagacacaataagttaataaaatctggcgataaaaccggagct
aacgcctatctgttgtcagatccactggataaatctgtgtactcaacagctcagttcttt
aatgacaattccatcaatgtttgtatggactccacctataattttgtcgataaagtggct
tatgaatttcaacaaatgtaccgcgaagcaggtttaaaactcacgaatatccatatcggt
ggcgatgaagtcggcgtaggctcttggaccgcgtctcctatttgtaatgcattataccaa
gctatagatagcggcgtaaaaggtcctgcagatcttaaagcctatttcactcgccgcgca
gcagaagtattagccgcgcgtgggctgaatattgctgcatgggaagatggcattatgttt
gacagaataacacctttccctatcgagcaatttgctaataataaagtctacgttaatgct
tgggataatatttgggaatggggtgtatctgaccgcgcatatcgactagcaaatgaaggc
taccatgcgattctttctatgggcacccacctgtactttgaccacccgcaagagcccgat
ccagcagaacgggggctatattgggcagcgcgctataccgatgtcgaaaaggtatttaac
ttcatccctgacaatgtatacgccaacgctgacttcacccgtgcgggtgaacccattgat
aacttagaagatctagttggacgcgctttacatcagctcaataagcctgagaatattgct
ggtattcaaggtcaagtttggagtgaaacaattcgcactcccgagcaattaggagaaatg
atttttccgcgaattattgccctagctgagcgaggatggcatcgcaatacagtgcttgcc
agtgagcaacaagagcaagcgcgtcaatgggctaagtttgcgagtgtgctcgcactgaaa
gagtatccaaagcttgaagaagctggagtaagcttttacttgccaattcctggtgccaaa
cgtatcgacaatcaagtgcatataatcagtcaattacctggattaacacttgagtacagc
ttagataatggagaaaactggcaagtgtataacaagcctatacgcttacctgacgccata
aaagttcgctcacgttcaggcaagcatacgagtcgtgtaggaagctttgagtag
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