Shewanella denitrificans: Sden_1007
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Entry
Sden_1007 CDS
T00344
Name
(GenBank) bacterial translation initiation factor 2 (bIF-2)
KO
K02519
translation initiation factor IF-2
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sdn03012
]
Sden_1007
03029 Mitochondrial biogenesis [BR:
sdn03029
]
Sden_1007
Translation factors [BR:
sdn03012
]
Eukaryotic type
Initiation factors
MTIFs
Sden_1007
Prokaryotic type
Sden_1007
Mitochondrial biogenesis [BR:
sdn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
Sden_1007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF-2
GTP_EFTU
IF2_N
IF2_assoc
MMR_HSR1
GTP_EFTU_D2
Ras
Arf
FeoB_N
Roc
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ABE54295
UniProt:
Q12QI1
LinkDB
All DBs
Position
1146603..1149257
Genome browser
AA seq
884 aa
AA seq
DB search
MADTSVQKLAAEVGKSVERLIEQFSEAGLKKGQADTVSETEKQQLLDYLKKQHGADKAPT
KMTLQRKTVSTLSVPAGGGQSKDVKVEVRKKRTFVKRDDSELVDQAELEAKAKAEADAKA
AAEAKQKADAEAQAKAAAEAKAKAEANKAKEKAPQAPAPKPKAELKAETPEAAAARAEAE
RIKATQEAVLTKKQKEEAAQAAEEAKKLAEVNSKRWAEEERLRLEAEKNGDHHVTTSKVA
RAAEDSSDMDDEKRGRRARNKPTNKKRGGKDARDGREKHMRNRSTAPQSMAHGFNKPVAA
VSRDVRIGETVSVAELAHLMAVKATEIIKQMMKMGSMVTINQILDQETAQMVAEEMGHKV
VLLRENELEEQVLGDRDDNVKLETRAPVVTIMGHVDHGKTSLLDYIRRAKVAAGEAGGIT
QHIGAYHVETDNGMITFLDTPGHAAFTSMRARGAKATDIVILVVAADDGVMPQTIEAIQH
AKAGNVPLIVAVNKMDKPDADPERVKSELSQHGVMSDDWGGDNMFVHLSAKTGEGVDELL
EGILLQSEVLELKAVREGMAAGVVIESQLDKGRGPVATVLVQSGTLRQGDIVLCGLMYGK
IRAMKDENGNAITEAGPSIPVEILGLSGVPSAGDEATVVRDERKAREVALYRQGKFRDVK
LARQQKSKLENMFANMEEGEVQELNIVLKADVQGSLEAICDSLTGLSTAEVKVNIIARGV
GALTETDATLAAASNAIMVGFNVRADAQARKTIEAESVDLRYYSIIYNLIDEVRAAMTGM
LAPEFKQQIIGLAEVRDVFKSPKIGAIAGCMVTEGIVKRSAPIRVLRDNVVIYEGELESL
RRFKDDATEVRNGMECGIGVKNYNDVRVGDQIEVFETIEVARTL
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacaagcgtacaaaaattagccgcggaagtgggtaaaagtgttgagcgactg
attgagcagttttctgaagcaggccttaaaaaaggtcaagctgatacagtatcagaaact
gagaaacaacagttactcgattacctaaagaagcagcacggtgctgataaagcgccaaca
aaaatgacattacaacgtaaaacagtgtcgaccttaagcgtgcccgccggtggtggtcag
tcaaaagacgttaaagttgaagtgcgtaaaaagcgtaccttcgttaagcgcgatgacagc
gagttagtcgaccaagcggaacttgaagctaaggctaaagccgaagcagacgcaaaagcg
gctgcagaagctaagcaaaaagctgacgccgaagcacaagctaaagcggcggcagaagcc
aaagcaaaagctgaagctaacaaagccaaggaaaaagcgccacaggcgccagcacctaag
ccaaaagctgaactgaaagctgaaacgccagaagctgctgcagcgcgcgctgaagcggag
cgcatcaaagcgactcaagaagctgtgctaactaaaaagcaaaaagaggaagcggcacaa
gctgctgaagaagctaagaaattagctgaagtcaactctaagcgctgggcagaagaagag
cgtttacgccttgaagctgaaaagaatggcgatcaccatgtcactacctctaaagtggct
cgcgccgctgaagacagttcagatatggatgatgaaaagcgtggacgtcgtgcccgtaac
aagccgaccaacaagaagcgtggcggtaaagatgcccgtgacggtcgtgaaaagcacatg
cgtaaccgcagcactgcacctcagtctatggcgcacggctttaacaagccagtggcagcc
gtaagccgtgatgttcgcatcggtgaaaccgtttctgtagctgaattggctcatttaatg
gccgttaaagccactgaaatcatcaagcagatgatgaagatgggttcaatggtgaccatt
aaccaaattcttgatcaagaaactgcgcaaatggttgcagaagagatgggtcacaaggtt
gttttacttcgtgaaaacgaactagaagagcaagtgcttggcgatcgtgatgacaacgtt
aagttagaaacacgtgcgccagttgtgactatcatgggtcacgtcgaccacggtaaaaca
tcattacttgattatatccgtcgtgcaaaagttgctgctggtgaagccggtggtattact
cagcatatcggtgcataccatgttgaaacagacaatggcatgatcaccttcttagataca
ccgggtcacgccgcgtttacttctatgcgtgctcgtggtgctaaggcgaccgatattgtt
attttggttgttgctgcagatgatggcgtaatgccacagactatcgaagcaatccaacac
gctaaagccggtaatgtgccgttaatcgtcgcggttaacaaaatggataagcctgatgct
gatccagagcgtgttaagagcgaattgtctcagcatggcgtaatgtcagatgattggggc
ggcgacaacatgttcgttcacctatcagctaagacgggtgaaggcgtagatgaactatta
gaaggcattttattgcagtctgaagttcttgaacttaaagcggttcgtgaaggcatggca
gcaggtgtggttattgaatcacaacttgataaaggccgtggtccagtcgcaactgtattg
gttcagtctggtaccttgcgtcaaggtgatatcgttctttgtggcttaatgtacggtaaa
atccgtgcaatgaaagacgaaaacggtaatgcaatcacagaagcgggtccttctatccct
gttgagatcttaggtctttctggcgtgccatcggcaggtgatgaagcgactgtagtacgt
gatgagcgtaaagcgcgtgaagttgcactttatcgtcaaggcaagttccgtgatgttaaa
cttgctcgtcagcagaagtctaagcttgaaaacatgtttgccaacatggaagaaggtgaa
gttcaagaacttaatatcgtgcttaaagcagacgttcaaggttcattggaagcaatttgt
gattcgttaacgggtctatctactgctgaagtgaaagtgaacatcatagcgcgcggtgta
ggtgcattgactgaaactgatgcaacattggcagcagcctctaacgctatcatggttggc
tttaatgttcgtgccgatgcacaagcgcgtaagactatcgaagctgaaagtgttgatcta
cgttactacagcatcatctataatctaattgatgaagttcgtgctgcaatgacgggcatg
ttagctcctgaatttaagcaacagattatcggtctggctgaagttcgtgacgtgtttaag
tctcctaagatcggcgcaatcgcgggttgtatggtgactgaaggtatcgttaagcgcagc
gcgccaatccgtgttctacgtgacaacgtggttatctatgaaggtgagcttgagtcatta
cgccgcttcaaagatgatgctactgaagtccgtaacggcatggaatgtggtatcggtgtg
aagaactacaatgacgttcgcgtaggcgaccagattgaagtcttcgaaaccattgaagtc
gcacgcaccttataa
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