Shewanella denitrificans: Sden_2434
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Entry
Sden_2434 CDS
T00344
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K24264
aspartate 1-decarboxylase [EC:
4.1.1.11
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00770
Pantothenate and CoA biosynthesis
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
Sden_2434
Enzymes [BR:
sdn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.11 aspartate 1-decarboxylase
Sden_2434
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Ortholog
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GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
SepSecS
Motif
Other DBs
NCBI-ProteinID:
ABE55714
UniProt:
Q12LG2
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Position
2898669..2900333
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AA seq
554 aa
AA seq
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MMAQLMTSITPRKAQASEDSMLRIFTVPEDAESTLSIIEQKLSEDLAGFLGNSIAALEKP
LSEIETDFQAFQIPTAPRFVSDYTDEIMQNLVAHSVHTAAPSFIGHMTSALPYFVLPLSK
MMVGLNQNLVKIETSKAFTPLERQVLGMMHHLVFSQDGDFYQQWMHSANHSLGAFCSGGT
VANITALWIARNRLLKADGNFNGVNREGMLKALRHYGFDDIAILVSERGHYSLGKAVDLL
GIGRDNIISIATTADNKVDVEAMRLAAKALASKNIKVMAVVGVAGTTETGNIDPLTELAA
LAQELDCHFHVDAAWGGASLLSKKYRHLLKGIELADSVTIDAHKQMYVPMGAGMVLFKDP
ELANAIVHHAEYILRVGSKDLGSQTLEGSRPGMAMIVHACLQIIGLEGYEILINNSLEKA
RYFSELIKKSPDFELITEPELCILTYRYVPSTVQLAMSDACQRQDWHALAQFNECLDGLT
QFIQKHQREQGKSFVSRTRIQPARYNRQHTTVFRVVLANPLTGLEILQGVLAEQQEIAAL
DNEFLPQLLALASA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgatggcacagttaatgacctcgataactccccgtaaggcccaagcgtcagaagacagc
atgttacgtatttttaccgtccctgaagacgccgagtctacgttaagcatcatagaacaa
aagttatctgaagatcttgctggcttccttggtaacagcatagcggcgttagaaaaacca
ttaagtgaaatagaaaccgattttcaagcgtttcaaatccctacagcacctcgctttgtc
tctgactataccgatgaaattatgcagaacttggtggctcactcggtccatactgcggcg
ccaagttttattggccatatgacatcagcgctgccctattttgtgctgcccttgtcaaaa
atgatggtcggtctcaatcagaatttggtaaaaattgaaacttccaaagcctttaccccc
ttagaacgccaagtgttaggtatgatgcaccaccttgttttcagtcaagatggcgatttt
tatcaacagtggatgcacagtgccaatcattctctcggcgccttttgctccggcggcaca
gtcgccaacatcacggcgctgtggatagcgcgaaaccgcttgcttaaagccgatggtaat
tttaacggtgtcaatcgtgaaggcatgctaaaagccctgcgtcattatggctttgatgat
attgccattttggtctcagagcgaggtcattattcccttggcaaggccgtagatctacta
ggcattggccgcgataacattatcagcatagccacaaccgcagacaacaaagtggatgtt
gaggccatgcgcctcgctgcaaaagcgcttgccagcaagaatatcaaagtcatggccgta
gtgggtgtggcgggtaccacagaaaccggcaatatcgacccactcaccgagcttgccgcc
ttagctcaggagcttgattgtcactttcatgtggatgcggcttggggcggcgcgagttta
ttgtctaaaaagtatcgacacttgcttaagggcatagagcttgcagattctgtcaccata
gatgcccacaaacaaatgtatgtgcccatgggggccggtatggtgttgtttaaagaccct
gaacttgccaatgccatagtccaccatgctgagtacattttacgggtgggttcaaaagat
ttaggcagtcaaaccttagaaggctcccgccctggcatggccatgatagtgcatgcttgc
ttgcagataatcggtcttgaagggtatgaaatcctcatcaataacagcctagaaaaagcc
cgttatttcagtgagctcattaaaaaatcccctgactttgaactaatcactgagcctgag
ctgtgcattctcacctaccgctacgtgcccagtacagtgcaattagccatgagtgatgcc
tgtcaacgccaagattggcatgcgttagcccaattcaatgaatgcttagatggtttgact
caatttattcaaaagcatcagcgtgaacagggcaagtctttcgtgtcacgaactcgcata
cagccagcccgctataacaggcagcacaccacagtatttagggtcgtgcttgccaacccc
ttaactggacttgagatcttgcagggcgtcttagcagagcagcaagaaattgccgcttta
gataacgaatttttgccccagttattagcattagccagcgcctga
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