Sphingomonas donggukensis: M9980_04020
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Entry
M9980_04020 CDS
T08944
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon01501
beta-Lactam resistance
sdon01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M9980_04020
01503 Cationic antimicrobial peptide (CAMP) resistance
M9980_04020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdon02000
]
M9980_04020
01504 Antimicrobial resistance genes [BR:
sdon01504
]
M9980_04020
Transporters [BR:
sdon02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
M9980_04020
Antimicrobial resistance genes [BR:
sdon01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
M9980_04020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
URW76397
LinkDB
All DBs
Position
complement(819841..823041)
Genome browser
AA seq
1066 aa
AA seq
DB search
MDSFFVHRPVFAWVIAAFVALFGAMALINLPIEQYPSVAPPSLTLAYNYNGADAETMDKN
VTAVIERELNGVDNFLYMSSSSRANGTGEIIVTFESGTDLDVARTQVQDRLNRAEPRLPE
DVRRLGIQIADNSAGFLEVITIQSKSGRTPALELGDFASTKVVNELRRVSGVGNAQLFSS
EKAMRIWLDPDKLAGFNLSPSDALAAVQEQNGQTAGGGLADQPTAPGADFNAKIVTQNRF
QTPEQFANIIIRANPDGSTVRLGDVARIEIGADNYQFKSTLDGKEVAGIAVQLAAGANAI
ATRDAVSARMKELERTFPQDIKWAVSYDTTPFISTSIDNVIRTLIEAMLLVFLVMFVFLQ
SWRATVIPAIVVPIALAGGCLGLWAFGFSINTLSLFAMVVAIGILVDDAIVVVENVERIM
AEEGLPPAQATIKAMGQIRGAIIGITLVLIAVFIPMAFFPGSTGGIYRQFSVTLAVSIFF
SAVLALTLTPALCATLLKPHKHAPGEERVPAEGWRGYPQRFFNWFNDYFGRATDRYIGGV
GAMLSRPVRWLAVFAAIFAVTLLLFGRLPGGFLPEEDQGYYVISYDAPVGSTADKTAVAV
KQTEAFLMKQPQFSQMFSVIGFNFFGQGQSAALSFVMLKPYEDRKGAENSVNAVIGATFG
ATAGIPGATIFALNPPAIQALGNATGFSMKIEDRVGNDPAGLQAAMGAIMAEAAKNPVLA
GVRPEGQAPSPQLYVDVDRVQARALGLSIADVNATLAISFGSAYANDFSNQGTVQRVYLQ
ADAPNRMTEDDVLALRVRNATGQMVPFSAFTRVSWTAGATQVQRYNGYPALTISGQAAPG
ESSGAALTAMEEIADRVLKPNFGYEWTGTAFEEKQAGGQIGLLLGLSLVVVFLLLAALYN
SWAIPLSVLLVVPFGVLGAVVFTMLRGLSADVYFNIGLITIIGLAAKNAILIVEFAIDDE
VGDRSPAEATLEASRQRLRPILMTSLAFILGMVPLVIASGAGAASRHAVGTGVMGGMITA
TAFGIFFTPVFYFAARKWLSSKKPDLHPERHGPDAPGAPEGTKAHA
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggacagtttcttcgtccaccgcccggtcttcgcctgggtcatcgccgccttcgtcgcg
ctgttcggcgcgatggcgctcatcaacctgccgatcgagcaataccccagcgtcgcgccg
ccatcgctcacgctcgcctacaactacaacggcgccgatgccgagacgatggacaagaac
gtcaccgcggtcatcgagcgcgagctgaacggcgtcgataatttcctctacatgtcgtcg
agcagccgcgcgaacggcacgggcgagatcatcgtcaccttcgaatccggcaccgacctc
gacgtcgcgcggacgcaggtgcaggacaggctgaaccgcgccgagccgcgcctgcccgag
gacgtgcgccgcctgggcatccagatcgccgacaattccgcgggcttcctggaggtcatc
accatccagtcgaaaagcggcaggacaccggcactcgagctcggcgacttcgcctcaacc
aaggtcgtgaacgagctgcgccgcgtgtcgggcgtcggcaatgcccagctgttcagttcc
gaaaaggcgatgcggatctggctcgatcccgacaagctcgctggcttcaacctgtcgccc
tccgacgcgctcgccgcggtgcaggagcagaacggccagaccgcgggcggcggcctcgcc
gaccagccgactgcgcccggtgccgacttcaacgcgaagatcgtgacacaaaaccgtttc
cagacgcccgagcaattcgccaacatcatcatccgcgccaacccggacggatcgaccgtg
cggctgggcgacgtggcgcggatcgagatcggcgccgacaattaccagttcaaatcgacg
ctggatggtaaggaagtcgccggcatcgccgtccagctggccgcgggcgccaacgccatc
gccacccgcgatgccgtcagcgcgcggatgaaggagctggaacgcaccttcccgcaggat
atcaaatgggcggtatcctacgacaccacgccgttcatctcgacctcgatcgacaacgtc
atccgcaccctgatcgaggcgatgctgctcgtctttctcgtcatgttcgtgttcctgcaa
agctggcgcgcgaccgtgatcccggcgatcgtcgtgccgatcgcgctggcgggcgggtgc
ctggggctgtgggcgttcggcttctcgatcaacacgctgtcgctgttcgcgatggtggtg
gcgatcggcatcctcgtcgacgacgcgatcgtcgtggttgagaatgtcgagcgcatcatg
gccgaggaaggcctgccgcccgcgcaggcaacgatcaaggcgatgggccagatccgcggc
gcgatcatcggcatcacgctggtcctgatcgcggtgttcatcccgatggcgttctttccg
ggctcgaccggcggaatctaccgccagttctcggtcacgctggcggtgtcgatctttttc
tcggcggtgttggcgctcacgctgacgccggcactgtgcgcgacgctgttgaagccgcac
aagcacgcgcccggcgaggaacgcgtgccggcagagggctggcgcggctatccgcagcga
ttcttcaactggttcaacgattatttcggccgcgcaaccgatcgctacatcggcggggtc
ggcgcgatgctgtcgcggccggtgcgctggctcgcggtgttcgcggcgatcttcgcggtc
acgctgctgctgttcgggcgcctgcccggcgggttcttgcccgaggaggaccaaggatac
tacgtcatcagctacgacgcgccggtcggctccaccgccgacaagaccgcggtcgcagtc
aaacagaccgaagcgttcctgatgaagcagccgcaattctcgcaaatgttctcggtcatc
ggcttcaacttcttcggacagggccagtccgccgcgctctcgttcgtgatgttgaagccc
tatgaggaccgcaagggcgcggagaattcggtgaacgcggtcatcggcgcgacgttcggc
gcgaccgcgggcattcccggcgcgacgatcttcgctctcaacccgccggcgatccaggcg
ctgggcaacgccaccggcttctcgatgaagatcgaggaccgcgtcggcaacgaccccgcg
gggctgcaggctgcgatgggcgcgatcatggcggaggcggcgaagaatccggtcctcgcc
ggcgtgcgtcccgagggacaggcgccctcgccgcagttgtacgtcgatgtcgaccgggtg
caggcccgggcgctcggcctcagcatcgccgacgtcaacgcgacgctcgcgatcagcttc
ggctcggcctacgccaacgacttctcgaaccagggcacggtccagcgcgtctatctccag
gcggacgcccccaaccgcatgaccgaggacgacgtactggcgctccgcgtccgcaacgcc
accggccagatggtgcccttctccgccttcacccgcgtgtcgtggaccgcgggcgcgacg
caggtgcagcgctacaatggctacccggcgctcaccatctcgggtcaggcggcaccaggc
gaaagctcgggtgcggcgctgaccgcgatggaggagatcgccgaccgcgtgctgaagccg
aacttcggctacgaatggaccggcaccgcgttcgaggagaagcaggccggcggccagatc
gggctgctgctcggcctgtcgctggtcgtcgtcttcctgctgctcgccgcgctctacaac
agctgggcgatcccgctgtcggtgctgctggtggtgccgttcggcgtgctcggcgcggtc
gtcttcacgatgctgcgcgggctgtcggcggacgtgtatttcaacatcggcctcatcacg
atcatcggcctggctgcgaagaacgcgatcctgatcgttgaattcgcgatcgacgacgag
gtcggggaccggtcgcccgccgaggcgacgctggaggcatcgcgccagcggctgcgtccg
atcctgatgaccagcctggcgttcatcctcggcatggtgccgctggtgatcgccagcggc
gcgggcgcggccagccgccatgcggtcggcaccggcgtgatgggcggcatgattaccgcc
accgcgttcggcatcttcttcacccccgtcttctacttcgccgcgcgcaagtggctgtcg
agcaagaagcccgatctgcatcccgaacgccacggccccgatgcgcccggggcgccggaa
ggaaccaaggctcatgcgtaa
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