Sphingomonas donggukensis: M9980_05665
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Entry
M9980_05665 CDS
T08944
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon01501
beta-Lactam resistance
sdon01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M9980_05665
01503 Cationic antimicrobial peptide (CAMP) resistance
M9980_05665
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdon02000
]
M9980_05665
01504 Antimicrobial resistance genes [BR:
sdon01504
]
M9980_05665
Transporters [BR:
sdon02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
M9980_05665
Antimicrobial resistance genes [BR:
sdon01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
M9980_05665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
DUF418
Motif
Other DBs
NCBI-ProteinID:
URW76955
LinkDB
All DBs
Position
1164877..1168071
Genome browser
AA seq
1064 aa
AA seq
DB search
MSRIFIDRPIFAWVIAIVIMLAGLGAMFSLPIAQYPDVAPPQVNIRATYPGASAETLENS
VTQVLEQQLTGIDGLLYFTSSSSSRGAVTISATFDKGTDPDIAQVQVQNSVQQAISRLPQ
QVQQQGLRVTKSNPDFLMIVAVYDESDKRTNADVSDYLVSNLQDALGRVPGVGESNVFGS
QYAMRVWLDPARLASVGLIPGDVITAITNQNTEVAAGEVGGLPNSAEQMLNATVTAQSRL
QTPEQFANIILKTQQSGATVRLADVARIELGQESYAAVSRVNGHPGAGIAVSLAPGADAL
ETAENVKAFVEGAAKNFPDGLTYAYPNDTTAFIKLSIEEVVKTLIEAVILVVIVMFVFLQ
SWRATLIPTIAVPVVLLGTFAVFALAGFSINTLTLFGLVLAIGLLVDDAIVVVENVERLM
EENPEMSPREATIESMNEITVALIAIALVLSAVFLPMAFFGGSTGVIYRQFSLTVISAMI
LSVVVALVLSPALTANLLKQRHAEKREGWAERRFPRAAHLVHRAGEKFNRGFEVASEKYV
AASQRVIDRKWIFLLIYAGVFALLVILFFRLPTSFLPSEDQGTVSVQFRLPAGATQNRTR
VVQEQVQDYFLGPESKNAKVMLTVAGGGGGGASGQNTGQGFINLTDWADRKGADNTADAI
AKRASGAFRGLRDAEVFVLVPPAIRGLGQSSGFTMELQNTGGLSREQFVAARERLLAAAN
ADPMLDRVRLSDLPDIATLRVDVDPTKLAALGLTQADVNATLSTAWGGRYVNDFIDRGRV
KRVYVQGDAPYRAAPEDIQKWFVRGSDGQMVPFSSFATISWSQAPTTLSRFSGVPAFEFQ
GQAASGTSSGEAMDRIAELAAQIPGTSVAWAGLSFQERLSSGQAPLLYGLSLLVVFLCLA
ALYESWSIPFAVLLVIPLGLVGAIFAVTLRGLENDVYLQIGLLTTMGLTAKNAILIIEFA
EQAEKKGKRVIDAALEAARLRLRPILMTSLAFIFGVLPLAISTGAGANSRIAIGTSVIGG
MLTATILAIFYIPLFFVLVRRGVRDGLAKMRGKPTGFQPREETA
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atttcccgcatcttcatcgaccggccgatctttgcgtgggtcatcgcgatcgtcatcatg
ctcgcgggtctgggcgccatgttcagcctgccgatcgcgcaatatcccgacgtcgccccg
ccacaggtgaacatccgcgccacctatcccggcgcgtcggcggaaacgctggaaaacagc
gtgacgcaggtgctggagcagcagctgaccggcatcgacgggctgctgtatttcacctcg
tcctcttcctcgcgcggcgcggtcaccatctcggcgaccttcgacaagggcaccgatccc
gacatcgcgcaggtccaggtccagaacagcgtgcagcaggcgatctcgcgcctgccgcag
caggtgcagcagcagggactgcgcgtcaccaagtcgaaccccgatttcctgatgatcgtt
gcggtctatgacgaaagcgacaagcggaccaacgccgacgtctccgactatctcgtctcg
aacctgcaggatgcgctcggccgcgtgccgggtgtgggtgaatcgaatgtgttcgggtcg
caatatgcgatgcgggtgtggctcgacccggcgcggctggccagcgtcgggctgatcccc
ggggacgtcatcaccgcgatcaccaaccagaataccgaggttgcggcgggcgaagtcggc
ggcctgcccaattccgccgagcagatgctgaacgcgaccgtcaccgcccagtcgcggttg
cagacgcccgagcagttcgcgaacatcatcctgaagacgcagcagagcggcgcaaccgtg
cgcctggccgacgtcgcccgcatcgagctgggccaggaaagctatgccgcggtcagccgc
gtcaacggtcaccccggcgccggcattgcggtcagcctcgcccccggcgccgacgcgctg
gagacggcagagaatgtgaaggcattcgtcgagggtgccgcgaagaacttccccgatggc
ctgacctacgcctatcccaacgacaccaccgccttcatcaagctgtcgatcgaggaggtc
gtgaagaccctgatcgaggcggtgatcttggtcgtcattgtcatgttcgtgtttttgcaa
agctggcgcgcgacgctgatcccgacgatcgcggtgccggttgtgctgctcggcaccttc
gcggtgttcgcgctcgccggtttctcgatcaacacgctgacattgttcggcctcgtcctc
gcgatcggcctgctggtcgatgatgccatcgtcgtcgtcgagaacgtcgagcggctgatg
gaggaaaaccccgaaatgtcgccgcgggaggcgacgatcgaatcgatgaacgagatcacg
gtcgcgctgatcgcgatcgcattggtgctgtcggcggtcttcctgccgatggccttcttc
ggcggatcgaccggcgtcatctaccgccagttttccttgaccgtcatttcggcgatgatc
ctgtcggtggtcgtcgcactcgtgctgagcccggcgctcaccgcaaacctgttgaagcag
cgccatgccgaaaagcgcgagggctgggccgagcgccgcttcccgcgcgcagcgcatctg
gtccaccgcgccggcgaaaaattcaaccgcggtttcgaggtcgcgagcgagaaatacgtc
gccgcatcgcagcgggtcatcgaccgcaagtggatcttcctgctgatatacgccggcgtc
ttcgcgctgctcgtgatcctgttcttccgcctgccgaccagctttctgccgagtgaggat
cagggcactgtatcggtccagttccgcctgcccgcaggcgcgacgcagaaccgcacccgc
gtcgtgcaggaacaggtgcaggattatttcctggggccggagagcaagaacgcgaaggtc
atgctgaccgtcgccggcggcggtggtggcggcgcgtcgggccagaacacgggtcagggc
ttcatcaacctgaccgactgggccgaccgcaagggcgccgacaataccgccgacgccatc
gccaagcgcgcgtcgggggccttccgcggacttcgcgatgccgaggtcttcgtgctcgta
ccgcccgccatccgcggcctcggccagtcgagcggcttcacgatggagctgcagaacacc
ggcggcctgtcgcgcgagcaattcgtcgccgcacgcgaacgcctgctcgccgccgccaac
gccgacccgatgctcgatcgcgtgcgcctgtccgacctgcccgacatcgccaccctgcgc
gtcgacgtcgatccgaccaagctcgccgcgctgggcctcacgcaggccgacgtcaacgcc
acgttgtcgaccgcgtggggcgggcgctacgtcaacgacttcatcgaccgcgggcgggtt
aagcgcgtgtacgtgcagggcgacgccccctaccgcgccgcgcccgaggatatccagaaa
tggtttgtccgcgggtcggacggtcagatggtgccgttctcgtccttcgccacgatttcc
tggtcgcaggcgcccaccaccctctcgcgcttttcgggcgtgccggcattcgaattccag
ggacaggcagcatcgggcaccagttcgggcgaagcgatggatcgcatcgccgagcttgcg
gcacagattccgggcacgtcggtcgcctgggccgggctctctttccaggaacggctgtcc
tcgggccaggcgcctttgctctacggcctgtcgttgcttgtcgtcttcctgtgcctcgcc
gcgctctatgaaagctggtcgatcccgttcgcggtcctgctcgtcatcccgctcggcctc
gtcggtgcgatcttcgcagtgacgctgcgagggctggaaaacgacgtgtaccttcagatc
gggctgctgacgacgatgggcctgaccgcgaagaacgccatcctcatcatcgaattcgcc
gaacaggccgagaagaaggggaagcgcgtcatcgacgccgcgctcgaggcggcgcgcctg
cggctgcgcccgatcctgatgaccagcctcgcgttcatcttcggcgtgctgccactcgcc
atttccaccggcgcgggcgcgaacagccgtatcgcgatcggcacgtcggtgatcggcggc
atgctgaccgcgacgatcctggcgatcttctacatcccgctgttcttcgtgctcgtccgc
cgcggcgtgcgcgacggactggcgaagatgcgcggcaagccgacggggttccagccgcgc
gaggaaaccgcatga
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