Sulfuricella denitrificans: SCD_n00738
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Entry
SCD_n00738 CDS
T02857
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sdr
Sulfuricella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdr03400
]
SCD_n00738
Enzymes [BR:
sdr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCD_n00738
DNA repair and recombination proteins [BR:
sdr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SCD_n00738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DUF3022
Motif
Other DBs
NCBI-ProteinID:
BAN34580
UniProt:
S6A9R7
LinkDB
All DBs
Position
743369..746692
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AA seq
1107 aa
AA seq
DB search
MTGNEINHAALNPAGSAVVEACAGSGKTWLLVSRIVRLLLAGAAPSEILAITFTRKAAQE
MAARLRDWLRLLALAPDEEVRAFLLERAVPEHEIESLLPRARNLFEIFLTAQPGITINTF
HGWFLQLLQRAPLNSGAGGDWGLLDQTSTLLEEAWQLFAEELQSEPDSEAAQALDFLFTE
HGLHNTRSLLLDFVAKRAEWWAYTQGEEDGAVFAAEALRHDLEVEPDRDVLAELFADSRL
AADAEEFAGMLERGTATDLKNVTKLRVALAGGDFESFCLVFLTGEGEPRKREYTKALAGR
LGEAGAARFLDLHRTISARLLGAKDQLAAQAAYRFNRAALRCGAGLLAAYQRLKEERRAV
DFTDVEWRVHELLNRSDHAEYMQYKLDCRYRHILLDEFQDTNPLQWQIMRSWLDASTGAG
SAPTVFLVGDPKQAIYRFRRADARLFGIAADFLEQGYGAARLQQNVSRRSAPPVLEAVNR
LFGQEAEFSGFELHEAHHTEIPGRVEVLPLAQGDQVEHAEAQPSVLTLRDPLIEALEEEE
DQRVEREAQQLAEKIGSMVGSWQIVTENGEGRTAEFRDILLLKRSRTRLEIYERALRTAG
IPYVSSRQGGLLETLECSDLTALLTFLITPFADLCLAQALRSPLFGCSDDDLMRLAKLPD
GSWWARLQALAVRGEAGPTLQRAADLLQSWLALTDTLPVHDLLDRIYFEGDLLPRYAAVP
EAMRGAVQANLHAFMELALTVDSGRYPSLPKFINELQQLRRAAAQEAPDEGIVGDAGNAV
RILTIHGSKGLESPIVWLLDAHASPRNERGYRAVIDWPPENPRPQYFFLYAGKRERAAQW
QPVFDAETQLERREDLNLLYVAMTRARQALIVSGSESTRKSEESWYGKLLRTVQATPPLP
NPSPTGGEGLFIIGQSLANGTPLPSRERGRGEGEKAVDALPRAIIPTGKRISQRQTEAQR
HGIRLHALLERIAPPAPVLDRAWLKDRLEVDDAEFDSLWQEALHLTQAPHLQRFFDPACY
VNAWKEVPYRTASGESRRLDRLVEFEDSVWILDFKAAEKVEEGNLAVCAAPYLGVMREYR
IAMEGVFAPKRVRAVLVFGNGLLFEID
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcaatgagatcaaccatgctgcgctgaatcctgctggttcagcagtggttgaa
gcctgcgccggcagcggcaagacctggctgctggtgtcgcgcatcgtgcgcctgctgttg
gccggggcagcgccgtccgaaattctggcgataaccttcacccgcaaggcagcgcaggaa
atggcggcgcgcctgcgcgactggctgcgcctgctggcgctggcaccggacgaggaagtg
cgagctttcctgctcgagcgcgctgtgccggaacatgaaatcgagtccctgctgccccgc
gcccgtaatttgtttgaaatcttcctcactgcccaaccgggtatcaccattaacactttt
catggctggtttctgcaactgcttcagcgcgcaccgctcaacagcggcgcgggcggcgac
tgggggctgttagaccagacttctacgctgctggaagaagcctggcagttgttcgccgag
gaactgcaatccgaacctgattctgaagctgcccaggcgctggattttctgttcaccgag
catggcctgcataacacccgcagcctgctcctcgactttgtcgccaaacgcgccgagtgg
tgggcttatacccagggagaggaagatggcgcggtctttgcggctgaagcattgcgccat
gatctggaggtggaaccggaccgtgatgtgctggccgagttgtttgccgatagccgtttg
gctgccgatgccgaggagttcgccggcatgctggagcgcggcactgccaccgatctcaaa
aatgtcacaaagctgcgcgttgctttggcgggaggtgatttcgagtcattctgtttggtg
ttccttactggcgaaggcgagccccgaaaacgggaatacaccaaggctctggcagggcgg
ctgggcgaggctggtgcagcgcgcttcctggatctgcaccggacgatttctgcgcgcttg
ctgggagcgaaagaccaactcgccgcgcaagccgcttaccgcttcaaccgcgctgccttg
cgctgcggcgctgggctgctcgccgcctaccaacgcctcaaggaggaacggcgggcggtg
gattttaccgacgtggaatggcgtgtccatgaactgctcaaccgttccgatcatgccgaa
tacatgcagtacaagctcgactgccgctaccgccatatcctgctcgatgaattccaggac
accaacccgctgcaatggcaaatcatgcgttcctggctcgatgcatcgacgggggcgggc
agcgcgccgacagtgtttctggtgggcgacccgaagcaggcaatctaccgttttcgtcgc
gccgatgcgcggttgttcggcatcgccgccgattttctggaacaaggctacggcgcggcg
cgactgcagcagaacgtctcccgtcgcagcgcgccgccggtgttggaggcggtgaaccga
ttgttcgggcaggaggctgaattcagtgggttcgaactgcatgaagcgcatcacactgaa
atcccgggtcgggtggaagtgctgcccctggcccaaggcgatcaagtagaacacgccgaa
gcccaaccgtcagtcctgaccttgcgcgaccccctgatcgaagcgctggaagaagaggaa
gaccagcgcgtcgagcgggaggcccaacaacttgcggaaaaaatcggcagcatggtcggg
tcatggcagatcgttacagaaaatggcgaaggcagaacggcggagttccgcgacatcctg
ttgctgaaacgcagccgcacccggctggaaatttacgagcgcgccctgcgcacggcgggt
atcccttacgtcagctcgcgtcagggcggtttgctcgaaacgctggaatgcagtgatctg
acggccttgctgacttttctcattacgccctttgccgacctgtgcctcgctcaggcgctg
cgctcgcccctgtttggctgtagtgacgacgacctgatgcgattggcaaaattgcctgac
ggttcctggtgggcgcgcctgcaggcattggccgtgcgcggtgaggcaggcccgacccta
cagcgggcagcggacctgctgcagagctggctcgcactcaccgataccctgccggtacac
gacctgctcgaccgcatctatttcgagggcgacttgctgccgcgctacgccgccgtgccg
gaagcgatgcgcggcgcggtacaggccaacctgcacgccttcatggaactggcgctgacc
gtggacagcggccgctatcccagcctgcccaaattcatcaacgaactgcagcagctgcgc
cgtgcggcggcgcaagaggccccggacgaaggcatcgtcggcgatgccggcaacgccgtg
cgcattctcaccatccacggttccaaagggctggaatcccccatcgtctggctgctcgac
gcccatgcttcgccccgcaatgagcgtggctaccgggcagtgatcgactggccgccggaa
aacccccgcccgcagtatttcttcctctacgctggcaaacgcgagcgcgccgcacagtgg
cagcccgtgttcgatgcggaaacccagttggagcggcgcgaagacctgaacctgctgtat
gtcgcgatgacccgtgcccgtcaggcgttgatcgtcagcggcagcgaaagcacacgcaag
tccgaggaaagctggtatggcaagttgctgcgcacggttcaggcaacgccccctctcccc
aacccctcccccactgggggggaggggcttttcatcattggacaatcgctcgccaatggc
acccctctcccctcgcgggagaggggcaggggagagggggagaaggcggtcgatgccttg
ccccgcgcaatcatccccaccggcaagcgcatcagccagcgccagactgaagcgcagcgc
cacggcatccggttgcacgcgctgctggaaaggatcgcgccgcccgcgccggtgctcgac
cgggcgtggctgaaagaccggctggaagtggacgatgcggagttcgattcgctctggcag
gaggccctgcatcttacccaagccccccatttgcagcgcttcttcgaccccgcatgctat
gtgaacgcctggaaggaagtgccctatcgcaccgcgtcaggggagagccgtcggctcgac
cggttggttgaattcgaggacagtgtctggatactggatttcaaggccgccgagaaggtg
gaggaaggtaatctggcggtttgcgccgcgccttatctgggggtgatgagggaatatcgg
attgctatggagggggtgtttgcgcccaagagggtgagggcggtgttggtgtttgggaat
ggcttgctatttgaaatcgattag
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