Sulfuricella denitrificans: SCD_n02432
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Entry
SCD_n02432 CDS
T02857
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr00500
Starch and sucrose metabolism
sdr01100
Metabolic pathways
sdr01110
Biosynthesis of secondary metabolites
Module
sdr_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
SCD_n02432
Enzymes [BR:
sdr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
SCD_n02432
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
BAN36240
UniProt:
S6AAU4
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All DBs
Position
2480609..2482741
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AA seq
710 aa
AA seq
DB search
MSLPISAIWPGAPFPRGATWDGEGVNFAIFSENATRVELCLFNPTGRREIQRIELRERTD
LIWHCYLPEARPGMLYGYRIHGPYDPANGHRFNPNKLLIEPYAKDLFGQLRWSDAHFGYK
IGHRREDLSFDRRDNAADMPKCRVIDPAFTWGEDKSPNIPWSDMVVYELHVRGLTKNHPD
IPPPLRGTYAGLATAPVINHLKRLGITSVELMPVHAFLDDRHLLERGLSNHWGYNTIGFF
APDHRYSSSGVVSEFKTMVKTLHSNGIEVILDVVYNHTAEGNHLGPTLSFRGVDNAYYYR
LVGDDPRYCMDYTGCGNTLNLQQPRALQLIMDSLRYWVLEMHVDGFRFDLASALARELHE
VNRLGAFFDILLQDPILSQVKLIAEPWDLGEGGYQVGNFPAGWGEWNDRYRDNMRSYWKG
DGGLIGDFAQRLTGSSDFYDHSGRKPYASVNFVTAHDGFTLHDVVSYHDKHNEANGEDNR
DGTDNNNTWNCGAEGPTEDANINALRAQQKRNLLATLFFSQGVPMLVAGDEMGRTQHGNN
NAYCQDNEISWVNWNLSTDDQEFLAFVQRVIALRREHPVFHRRNFFQGRAIHGSGTKDIH
WFKPDGSEMNDEEWAHDFARCLGVFLGGESMQEQDRRGQPIRDDNFLLLFNSHHENIPFS
LPVLCEGGVWQSVLDTHLAGGLEPDGQFQDGDTYPLAGRSLALLIQRSSS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgagtctacccatcagcgccatctggcccggcgcccctttcccacgcggcgccacctgg
gatggcgagggggtcaacttcgccatcttttccgagaacgcgacacgcgtcgaactgtgt
ttgttcaaccccaccggacggcgcgagattcagcgtatcgagctgcgcgagcggaccgac
ctgatctggcattgctacctgccggaggcgcgcccaggaatgctctacggctaccgcatt
cacggcccctacgacccggcgaacggtcaccgcttcaaccccaacaaactgctgatcgag
ccttacgccaaggacctcttcggccagttgcgctggagcgatgcgcacttcggctacaag
atcgggcaccgccgcgaggacctgtccttcgaccgccgcgacaacgccgccgacatgccc
aagtgccgcgttatcgatccagccttcacctggggcgaggacaagtctccgaacatcccc
tggtccgacatggtggtgtacgaactgcacgtgcgcggcttaaccaagaaccaccccgac
attcctccgcccctgcgcggcacctatgccggcttggcgacggcgccggtcatcaaccat
ctcaagcgcctggggattacctcggtggagctgatgccagtgcacgcctttctcgacgac
cgccatcttctcgagcgggggctttccaaccactggggctacaacaccatcggtttcttt
gcccccgatcatcgttacagttccagcggcgtggtgagtgagttcaagactatggtcaag
accctgcactcgaacgggatagaggtcatccttgacgtggtctacaatcacacggccgag
ggcaaccacctcggaccgacgctctccttcaggggcgtcgacaacgcctactactaccga
ctggtcggcgacgatccgcgctactgcatggattacacgggctgcggcaacaccctcaac
ctgcagcagccgcgcgcacttcagctgatcatggactcgctgcgctactgggtactggag
atgcacgtcgacggcttccgcttcgatctggcctcggccctggcgcgcgaactgcacgaa
gtcaaccgcctcggcgccttcttcgatatcctgctccaggacccgatactgtcacaggtc
aagctcatcgccgaaccctgggatctgggtgagggcggctaccaggtgggcaactttccg
gcgggctggggcgagtggaacgaccgctaccgtgacaacatgcgctcctactggaagggc
gatggcggcctgatcggcgattttgcgcaacgtctcaccggctccagcgatttctacgat
cacagcggtcgcaagccctacgccagcgtgaatttcgtcaccgcccacgacggtttcacc
ctgcacgacgtggtgagttaccacgacaagcacaacgaggccaacggcgaggacaaccgc
gatggcaccgacaacaacaacacctggaactgcggcgccgaaggtcctaccgaagatgcc
aacatcaacgccctgcgcgcgcagcagaagcgcaacctgctggcgacgctgttcttctcc
cagggtgtaccgatgctggttgccggcgatgagatgggccgcacccagcacggcaacaac
aatgcctactgccaggacaacgagatcagctgggtgaactggaatctttccacggacgac
caggaattccttgccttcgtgcaacgcgtcatcgctctgcgacgcgaacacccggtattc
caccgtcgcaacttcttccagggccgcgccatccacggctctggcaccaaggacattcac
tggttcaagcccgacggcagcgagatgaacgacgaagagtgggctcacgatttcgcgcgc
tgtctcggcgtctttctgggcggcgaaagcatgcaggagcaggaccggcgcggtcaaccc
atacgcgacgataatttcctgctgcttttcaacagccaccacgaaaacatacccttcagc
ctgcccgtactatgtgaaggcggcgtgtggcagagcgtcctggacactcacctcgccggc
ggcctggaacctgacggccaattccaggatggagacacttaccccctcgcaggccgctcg
ctcgccctcttgatccagcggagttcatcatga
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