Seriola dumerili (greater amberjack): 111220537
Help
Entry
111220537 CDS
T05606
Symbol
cyld
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04217
Necroptosis
sdu04622
RIG-I-like receptor signaling pathway
sdu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
111220537 (cyld)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
111220537 (cyld)
04625 C-type lectin receptor signaling pathway
111220537 (cyld)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdu01002
]
111220537 (cyld)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111220537 (cyld)
Enzymes [BR:
sdu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111220537 (cyld)
Peptidases and inhibitors [BR:
sdu01002
]
Cysteine peptidases
Family C67
111220537 (cyld)
Ubiquitin system [BR:
sdu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111220537 (cyld)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
111220537
NCBI-ProteinID:
XP_022599345
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MSSVLWSQEKPSGGFREDWRFYMVVKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PCKGKKSLRILDQTNVVLSLDERDVQELDEKLAELLFPITNCEERYALLCNKSRLERVCD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWEDDDDETLGELEVDHVNLVEEDQDFPRLEINSRVLVQTR
DGPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICD
VMPEYSMQDQRLQKHSFAPRGTNSDKSSSGQSKPKSKGLGHQCGSRSKSEFYYTLNGSSV
DPPAQSKSKSTWYIDEVGEDPAKSLTDTPPDFNQSSPPSRAPPSSSLSSDNKFHSLPFSL
NRKTGPIDSMSHGPLSLSVQSVMGEQPEPPSPVAPPSPRPPTPPRGQPGLEVGSLVEVKE
NPPLCGVIRWVGLHPGLLEPLAGLELVRQHSNEEECPGCTDGTFKGTRYFTCPPKKALFV
KLKCCRPDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDIMVGKKKGI
QGHYNSCYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYV
CATKVMKLRRILENVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYF
YQIFMDKKDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLE
LDITDLLEDTPRECRICGGLALYECRDCYEDGDITAGKIKQFCEKCNTQVHLHPRRKAHR
HGKLSVPKELQEGTGRQGSFPRQRMELFAVLCIETSHYVAFVKYGSADSAWLFFDSMADR
DGGQNGFNIPQVSPCPEVEVYLKMTPEELHALDPKSIQGQARRLLCDAYMCMYQSPTMSL
YK
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgtcctatggagccaggagaagcccagtgggggcttcagggaggactggcgc
ttctacatggtcgtgaaggagtgtacagtggagaagcctccccagaagaccctgaggatc
ccacgtggcagtcttggccaggcatgccaggagcgcaacagcctggggagaacactgccc
ccatgcaaaggcaaaaaaagtctccgcattctggaccagaccaacgtggtgctgagcctg
gatgagcgggacgtccaggaactggatgagaagctggctgagctgctgttccccattacc
aactgtgaggagagatatgccctgctctgcaacaagtcacggctagaacgcgtctgtgat
attgactgtggatccaaggtccgcgtccagttgcgctcaggggatgaacctctgcctggt
gtggtccgcttcaagggctcgctgcttcctgacagggcactctctggaatctggtttgga
gtggagctgctggaggagggccggggccaaggcttcacagagggctcctaccagggccgc
caacttttccgctgtgaggatgaatgcggtgtgttcgtggcccttgacaaacttgaactc
tgggaggatgatgatgatgaaaccttgggtgagctggaggttgaccacgtaaatctagtg
gaagaggaccaggacttccctcgactggagatcaactccagggtcctggtgcagaccagg
gatggacccgagagaggcaccatcattttttgtgacctgctgccaggaaatgagagcctg
ggctactatgtgggagttgacatggacaatcctatcggggactgggatggtgtgattgac
gggaagttgctgtgtaattttgccagtttggagcacactcgacttgtccccatctgcgac
gtaatgccagaatattccatgcaggaccaaaggctgcaaaagcacagttttgcccccaga
ggcaccaacagtgacaagtcgtcctctggccaaagcaaaccaaagagcaaaggattaggt
catcagtgtggcagtagaagcaagtctgaattttactatactttaaatggcagctctgtt
gatcccccagcccagtccaaatccaaaagcacatggtacattgatgaagttggggaggac
cccgccaagtcacttactgacacgccccccgacttcaaccaatcctccccgccctccaga
gccccgccctcttcctcgttgtctagtgacaacaagttccactctctgcccttcagcctc
aaccggaaaactgggcccattgatagcatgagtcatgggcctctctccctctccgtccag
tcggtgatgggagagcagcctgagcccccgtcgcctgttgcgcctccctcaccgcgacct
ccgacgcctccccgtgggcagccaggcctagaggtgggctctctggtggaggtgaaggag
aacccccctttgtgtggtgtcattcgctgggtgggtctgcatcctggcttgctggagcct
ctggctgggctggagctggtgagacaacacagcaatgaagaagagtgtcctggttgcact
gacggcaccttcaaaggcacgcggtacttcacctgtccacccaaaaaagccctgtttgtg
aagctcaagtgctgccggcctgactcccgcttcccgtcccttcaccactcctccaatccc
atagagaggtgcaactccatcgcatttgggggttacctgagtgaggtagtacatgagaac
acgcctccccgcacagagaacgatggtctggatatcatggtgggaaaaaagaaaggcatc
cagggccactacaactcttgttacctggattcaactctcttctgtcttttctccttcagt
tctgtactggacacggttctgctgagaccacgatcaaagactgatgtagagtattacaga
gagacccaagagctgttacgcacagagatagtcaaccccctgcgcatacatgggtatgtg
tgtgccacaaaagtgatgaaactaagaaggatcctggagaacgtggaggctgcctctggg
tttacctctgaagaaaaagatcctgaggagttcctcaatatccttttccatcacatactg
agggtggatccgctgctcaagctaaggtcagcaggacagaaggtccaggactgttacttt
taccagatcttcatggacaagaaagacaaggttggagttcccactatccagcagctcctg
gagtggtccttcatcaacagtgacctaaagtttgcagaggctccctcctgccttattatc
cagatgccccgttttggcaaggactttaagatgttcaacaagattttcccttcgctagag
ttagacatcacagaccttcttgaagacactccaagggaatgtcgaatctgcggaggcctg
gctctgtacgagtgtcgagactgttacgaagacggggatatcactgcgggcaagattaaa
cagttctgtgaaaagtgcaatacacaggttcacctccacccgaggaggaaagcccatcgg
cacggcaaactgtctgtcccaaaggagctgcaagaaggtacggggcggcagggcagtttt
ccccgtcagaggatggagctgttcgctgtgctgtgcatcgaaaccagtcactacgttgcc
ttcgtcaagtacggcagcgcagattccgcctggctcttcttcgacagtatggcagaccgt
gatggaggccagaatggtttcaacatcccccaggtgtcaccctgtccggaggtggaggtc
tacctgaaaatgaccccagaggagctgcacgctctggatcccaagagcatccagggccag
gcccgacgcctgctttgtgatgcctacatgtgcatgtaccagagtccgaccatgagcctg
tacaagtag
DBGET
integrated database retrieval system
