Seriola dumerili (greater amberjack): 111220877
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Entry
111220877 CDS
T05606
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03022
Basal transcription factors
sdu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111220877 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
111220877 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdu03021
]
111220877 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111220877 (gtf2h4)
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111220877 (gtf2h4)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111220877 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
111220877
NCBI-ProteinID:
XP_022599861
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MLSETELPDVNNAVILYYRVISKPGIPRYFKSTLTIMKLRVQLQCKNLHEYLRELSPDIL
DRLYNHPATCLAVYRELPSLAKNYVMRMLFLDQPLPQAAVALWVKKDSHKDHDECVSVLA
GLRLWHSQQLQGGLQGYILNPVFKDNLRIALLGGGRAWADEGSTLGPDRHARDIESLDRY
AMERWEVILHFMVGSPSAAVSQDLAQLLVQAGLMKSEAGEAPYITSAGFQFLLLDTASQL
WYFTLQYLKTAQSRGMDLVEILSFLFQLSFSTLGRDYSVEGMSESLLTFLQHLREFGLVF
QRKRKSRRYYPTRLAITLAAGVTTSSPSSSSSSSSNLASTPSTGDAGFIVVETNYRIYAY
TNSELQIALVALFSEMLYRFPNVVVAQVTRESVQQAIANGITAQQIIHFLRTRAHSVMHK
QTPVLPPTITDQIRLWELERDRLQFTEGVLYNQFLSQADFEVLRDRAQGLGCLVWQDVAH
RVMVVTPQGHSEVKRFWKRQKSHT
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcttagcgaaacagaactacctgatgtcaacaatgcagttatattgtactatagagta
atttcaaaaccgggaattcctcgatatttcaaatcaaccctcacgataatgaagctgcgt
gtccagctgcagtgtaagaatttgcatgaatacctgagagagctgagtcctgacatactg
gacagactgtacaaccatccagcaacatgtctggctgtctacagggaactcccctcactg
gccaagaattatgtgatgcgtatgctgttcctggatcagcccctgccccaggcagcagtg
gcattgtgggtgaaaaaagacagtcataaggatcatgatgaatgtgtctcggtgttggca
ggactccgcctctggcacagtcagcagctgcagggtggcctgcagggatacattttaaat
ccagtgttcaaagacaacctgaggatagccctgctcggcgggggccgggcgtgggccgat
gagggcagcactctgggtcctgaccgccatgcacgggacattgagagtcttgaccgctac
gccatggagcgctgggaggtcattctgcatttcatggtgggttctcccagtgccgctgtc
agccaggacctggctcagctgctggttcaagcaggcctcatgaaaagtgaggcaggagaa
gcgccgtacatcacctcagctggtttccagttcctcctactggacacagcctctcagctg
tggtacttcaccctgcagtacctcaaaactgctcagtccagagggatggacctggtggag
atcttgtcattcttattccagctcagtttctcgactctgggcagagattactcggtggag
ggcatgagcgagtcattactcaccttcctgcagcacctgcgggagtttggactggtcttc
cagaggaagaggaagtcgaggcggtactaccccaccaggctggccatcactctggcagcg
ggggtcacgaccagctccccctcctcctcctcctcctcctcctctaacttggcttccact
cctagtactggagatgctggcttcattgtggtggaaaccaattatcgcatctatgcctac
acaaactcagaacttcagatcgctctggtggctctcttcagtgaaatgctgtatcgcttt
cccaacgtggtggtggctcaggtaacgagggagtcagtgcaacaggccatcgccaacggc
atcactgcacagcagattatccactttctaaggaccagagctcactccgtcatgcacaaa
cagaccccagtgctgcctccaaccataacggatcagatcagattgtgggagctggagaga
gatcggctgcagttcacagagggagtgctctacaaccagttcctctcccaggcggacttc
gaggtgctgcgagacagagctcagggtttgggctgtctggtgtggcaggacgtggctcac
agggtgatggtggtgacgccgcagggacacagcgaggtcaagaggttctggaagcgacag
aagtctcacacgtaa
DBGET
integrated database retrieval system
