Seriola dumerili (greater amberjack): 111221616
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Entry
111221616 CDS
T05606
Name
(RefSeq) contactin-3-like
KO
K06761
contactin 3
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111221616
Cell adhesion molecules [BR:
sdu04515
]
Immunoglobulin superfamily
Contactins
111221616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_C17orf99
Ig_5
Pur_ac_phosph_N
Tissue_fac
Interfer-bind
Pox_C7_F8A
Mfa1
Motif
Other DBs
NCBI-GeneID:
111221616
NCBI-ProteinID:
XP_022600790
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MMFPWKQIVLLSITGCLAACTEDVIFQGPRWRTAPSDLILPINSPDQQATIVCEAEGSPP
PQYRWSLNGTLIDLGNDYRRHMSGGSLIISNLDKDQDTGEYQCTAFNTWGSILSRRASLQ
FAYLDNFKTQTVRSAVNVREGQGVVLLCGPPAHSGELAFAWIFNEYPYFVQQDSRRFISQ
ETGSLYIAKVEPSDVGNYTCVVNNTVTREKVLSSPTPLVLRSDGVMGEYEPKIEVHFPDS
VPAAKESVVKLECFALGNPVPEISWRRTSGVPFPNKVKMKNSNGVLEIPNFQQEDAGTYE
CTAENRRGKNAARGRISFHAKPHWLQTMTDTALSIEENLFWECKANGKPKPSYSWLKNGE
QVMAEGRVQIENGALSIAALNLSDSGMYQCVAENKHGIIYSSAQLMVLASPPSFSKSPLR
ALLKARSGSEVTLECKPQASPPAISLWKKGNEILQRTERITLLSNGTLKIANVTRRDAAT
YTCIAKNQFGTASTTGRLLITEPTRITMRPTNMEIIVGESIVLPCQIACDPALDVSFSWA
FNGQLIDFQRDSNHFERVGGSISGDLMIRNIQLNHGGKYVCVIETDVESLSTSAILVVKG
PPGPPDKVSVEEITDSTAQLSWTPGRDNGSPITGYIIQGRTPFTVGWQAVDTVPEVVNGN
MLTATVVGLNAWVEYEFRVVARNAVGLGEPSPASAKTRTEDAIPDTAPTDVGGGGGTKSE
LVITWEPVPEELQNGEGFGYIIAFRPVGTVTWTRAVISTTGVARYVFRNDTIPPFSPFDV
KVGAYNNRGEGPFSSIASVYSAEEVPSVAPKRVRARSVSAAQIEVIWEALPAIPERVLGY
EVVYWEDDTKPDTVGKVRISGNYTLVNITGLKANTVYYLSVAAFNTAGPGPQSAPINTTT
KKPPPDRAPLNIQWTMIGSMLTLHWDPVVAMETESKVTGYLVLLKRHRYNDINTILTNKT
TAELSLSTNDNYLIQIKATSEGGDGVGSEPIHIHKLSMGARGSGASAFSPLYLSAVLISA
LLCSIW
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttccatggaaacaaattgttctgctatcaatcactggatgccttgcagcctgt
acagaggatgtcatatttcaagggccaagatggaggacggcgccaagtgacctcatttta
ccaatcaactccccagaccagcaggctaccatcgtgtgcgaggcagaagggagccctcct
ccacagtacagatggtcactaaacggaacactcattgatctggggaatgactaccggcgt
cacatgtctgggggcagcctgatcattagcaacctggacaaggaccaagacaccggggag
taccagtgcacggccttcaacacatggggctccatcctcagccgcagagccagcctccaa
tttgcatatcttgacaacttcaaaacccaaacggtgaggagtgctgtcaacgtccgtgag
ggccaaggagtggttctgttatgtggaccacctgcacattctggagagctggcatttgca
tggatcttcaatgaatacccatacttcgtccaacaagacagtcgtcggttcatctctcag
gagacagggagtctgtatatcgctaaggtggagccctcagatgtgggaaactatacctgt
gtggtgaacaacaccgtcacgagggagaaggtgctcagctctccaacaccactggtcctc
agaagtgacggagtaatgggtgaatatgaacccaaaatagaagttcatttccctgattcg
gttccagctgcgaaggagtcggtagtgaaactggaatgcttcgctctgggaaaccccgtc
ccagaaatcagctggaggagaaccagcggcgtccctttccccaacaaagtcaaaatgaag
aattcaaacggcgtccttgaaatccctaatttccagcaggaagacgcggggacgtacgaa
tgtacggcggagaatcggcgaggcaaaaatgctgcgcggggtcgtatttcattccatgct
aaacctcactggctccagacaatgacggacacggctttgtccatcgaggaaaatctcttc
tgggagtgtaaggccaatggaaagcctaaaccgtcctacagctggctgaaaaatggggag
caagtgatggcagagggccgggtacaaatcgaaaacggggccctttctatagctgcgtta
aacctgtcagattccgggatgtatcagtgtgtggctgaaaacaaacatggcattatttat
tccagtgcccaactaatggtgttagcttcacctcccagtttctccaaaagtccgttaagg
gccctgctaaaagctcgctcaggcagcgaagtcactcttgaatgcaagcctcaggcctcg
cccccagcaattagcctgtggaagaaagggaatgagatcctgcagaggactgaaaggatt
actttgctttccaatggaacattaaagattgccaacgtaaccagacgggatgcagccacc
tacacgtgcatcgctaagaaccagtttgggacagcaagcacaactgggaggctgcttatc
accgagcccaccagaatcaccatgaggcctactaacatggagattattgttggcgagagc
atcgtgctaccctgccagattgcctgcgatccagctctggatgtctctttctcgtgggca
ttcaacggccagctcatcgacttccagcgagacagcaatcattttgaaagagtgggcggg
agtatatcaggggatctgatgattcgtaacatccagctgaaccatggagggaagtatgtt
tgtgttattgagactgatgtggagagcctgtccacctctgcaatcttggttgtcaaaggt
ccgccaggtcctccagacaaagtatcagtggaggagatcactgacagcacggcacagctt
tcttggacgcctggaagagacaacggcagccccatcaccggctacatcatccagggccgc
acgccttttactgtgggctggcaggctgtagacacagtaccagaagtggtcaatgggaat
atgctgacagccacagtggtgggtctgaatgcctgggtggagtatgagtttagggtggtg
gctcgcaatgccgtaggcctgggagagcccagcccagcctcagccaagaccaggacggag
gatgccattcctgatacagctcccactgatgtcggaggtggaggcggcacaaagtctgaa
ttagtgataacatgggagcctgtgcccgaagaactgcagaatggagagggcttcggctac
atcatcgccttcaggccggtgggcacggtcacgtggacgcgggcggtcatctctacaacc
ggcgtggcacgttacgtcttccgcaacgacaccatcccgcccttctcgccttttgacgtg
aaagtgggggcatacaacaaccgaggggagggtcctttcagctctattgcctccgtgtat
tcggcggaggaagtccccagtgtggctcctaagagggttagggctagaagtgtgtctgca
gcacaaattgaagtgatctgggaagctctccctgccatccctgaaagagtgcttggatat
gaggttgtgtactgggaagacgacaccaaacctgacactgttggcaaagtgcgcatatct
ggaaactacacgctggttaacatcacagggctgaaagcgaacacagtgtactacctctct
gtggctgctttcaatacagctggccctgggccgcagtcggcacccatcaacaccaccaca
aaaaaaccacctccagaccgggctcctctcaacatacaatggaccatgattggctccatg
ctcacgctgcactgggatcctgtagtagccatggagacagagtcaaaggtcactggatat
ttggtgctgctaaagagacatcgctacaatgacatcaacaccatcttgaccaacaaaacc
acggcggagctcagcctctccaccaatgacaactatctaattcagatcaaggccacaagt
gagggtggcgacggtgtgggcagtgaacccatccacatccacaaactaagcatgggagcg
cggggctcaggagcgagcgcctttagcccgttgtacctctctgcagtcctcatcagtgca
ctgctctgctccatctggtga
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integrated database retrieval system
