Seriola dumerili (greater amberjack): 111221661
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Entry
111221661 CDS
T05606
Symbol
lrig1
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 1
KO
K24610
leucine-rich repeats and immunoglobulin-like domains protein 1/3
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
111221661 (lrig1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
Ig_2
ig
LRR_5
LRR_1
V-set
LRR_9
C2-set_2
Ig_5
LRRNT
Ig_C17orf99
LRR_6
LRRCT
Ig_4
Receptor_2B4
DUF5546
Motif
Other DBs
NCBI-GeneID:
111221661
NCBI-ProteinID:
XP_022600864
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MAASLGRFGFVSRCVFYLILTVELFNSRGFGSDLPCAQNCTCNGDSVDCSNLELTATPLD
LPTRTVSLNLGHNKLTAISVEAFANLPNLRELRLDHNELTSIPDLGQAASKIVSLYLHHN
KMRSIDGRRTRELVSVETLDLSNNDITELRGHCFTAGLQIRDLYLSNNKISVLELGALDH
LGSTLQVLRLSRNRISQIPVRAFQLPRLTQLELNRNRIRQVEGLTFQGLSSLEVLKLQRN
NISKLTDGAFWDLAKIKYLHLDYNSLTEVNSGSLYGLTSLQQLFLSNNSIARINPDGWKF
CQKLRELNLSYNNLTRLDEGSLAVLGDLHTLRLGHNSISHITEGAFRGLKSVRVLELDHN
DISGTIEDTNGAFSGLESLNKLTLFGNKIKSVAKKAFSGLETLEHLNLGENAIRSIQPDA
FSKMKNLKTLFIQSDSFLCDCQLQWLPDWLVTRGLQASVNATCAHPESLKGTTIFQAPSS
SFVCDDLPKPQITAQPETTVTVLGSDVRLTCTAASSSSSPMTFAWRKDQELLRHAETENY
AHVQAHHQGTTPDVPAANGGVMEYTTILHLRHVTFAHEGRYQCIITNHFGSTYSSKARLI
VNVLPSFVKTPKDSTIRTGHKARLECAAEGHPAPQIAWQKDGGTDFPAARERRMHVMPDD
DVFFIMDVKPEDMGVYSCTAKNTAGTISANATLTVLETPHLAQDLEDRSVVVGDTVALQC
KALGSPPPRITWLRNDQPLRPSDRHHFTPGNQLLVIGSASLEDAGRYTCLMSNTLGTERA
HSQLVVTQRRSPCTSPPGPSTVTIGIIVIAVVTSIVVTSLVWVCIIYQTRKKSEECSVTN
TDETIVPPDVPSYLSSQGTLSERQDVCIRVEAGGGPQPNGHIVDTTGYDGAVVCTDCMEN
SSSYSKDPDYLTHSFGPVGGMEYQQHSVPPPYSHFHPVEHHEPASHTTLLCNGTPNGIRK
DIQGSTFPKNHNTLQGNQQDRKASRAGQTLACSPPQEESFHKPVKLAGVTSHGLSDTDCE
PELRQTLLSNGHTLRASQNESTPLRRASD
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccctgggacgatttggatttgtttctcgttgtgttttttatttaattttg
acggtcgaactgtttaacagtcgtggattcggttcagacttgccttgtgcccagaactgt
acctgcaacggagattcagtggactgtagcaatctggagctgacagctacgcctctggac
cttccaacccggactgtttccttaaatcttggccacaacaagctgaccgccatcagtgtt
gaagcgtttgccaacctgcctaacttgagagagctgcggctggaccacaatgagctgacc
tccataccagatttaggacaggctgcttccaagattgtatcgctctacctacatcacaat
aagatgcggagtattgatggcaggcggaccagagagctggtgtctgtggaaactctggac
ctgagcaataatgacatcaccgagctacgagggcactgctttactgccggcctccaaatt
cgagacttgtacctgagcaacaacaagatcagtgtgttagagctcggagctctagaccat
ctgggctcgacactacaggtcctgagactgagccgaaaccgcatcagccagatccccgtg
agagccttccagcttccgaggctcacccagctcgagctgaacaggaaccgtattcgtcaa
gtagagggtctgaccttccagggtctgtccagcctggaggtgctgaagctgcaaagaaac
aacatcagcaagctgactgatggggccttttgggacctggcaaagatcaaataccttcac
ctggactacaacagtctgacagaggtgaacagtggctccctatacggcctgacctccctt
cagcagctattcctcagtaacaactctatagcccgcatcaatcctgatggatggaagttc
tgccagaagctgagggaactcaatctgtcgtacaacaacttgactcgtctggatgaaggc
agcctggctgtgctgggggatctccacacccttcgtctgggccacaactccatcagccac
atcaccgagggagccttcagaggcctcaagtccgtacgcgtcctggagctggaccataac
gacatctcgggcacaatagaggacaccaatggggccttctctggattggaaagcctcaac
aagctgactctgtttggaaacaagatcaagtcggtggccaagaaagccttctctggcctg
gagaccctggaacacctgaacttgggcgagaatgctattcgttccatccagcccgatgcc
ttcagtaagatgaagaacctcaaaacccttttcattcagagcgacagcttcctgtgtgac
tgccagctccagtggctgcctgactggctggtgacacgtggtttgcaggccagtgtcaat
gccacttgtgctcacccggagagcctcaagggcaccaccatcttccaggccccgtccagc
agctttgtgtgtgacgaccttcccaagccccagatcacagcacaaccagaaaccacagtg
acagtccttggtagcgatgtgcgtctcacctgtacggccgcgagcagcagctcatccccc
atgaccttcgcatggcgcaaggaccaggaactgcttcgacacgctgagacagagaactac
gctcacgtacaagctcaccaccaaggcacaacacctgatgtgcctgctgcaaatggaggc
gtgatggagtacaccactatcctgcacctgcggcatgtcaccttcgcacacgagggccgt
taccagtgcatcatcaccaaccactttggctccacctactccagcaaagcccgcctcatc
gtcaatgttcttccatcctttgtgaagactcccaaggacagcaccatcaggacgggccac
aaagccaggctggagtgtgctgctgagggccacccggcacctcagatcgcctggcagaag
gacggaggcacagacttccctgcagcccgtgagcggcgaatgcacgtcatgcctgatgac
gacgtgttcttcatcatggatgtcaagccggaagacatgggcgtgtacagctgcactgct
aaaaacacagcgggcacaatttctgccaacgccaccctcactgtgctcgaaaccccccat
ctagcccaggacctggaggatcgcagcgtagtagtcggggacacggtggctctacagtgc
aaggccctgggcagtccaccaccccgcatcacttggctgcgcaacgaccagcccctgcgc
ccctccgacagacaccacttcaccccggggaaccagctgctggtcatcggatccgcctcg
ctggaggacgccggtcgctacacctgcctcatgtccaacacactgggcacggagcgcgct
cacagccagctggtggtgacgcagcgcagaagcccctgcacctcaccgccgggccccagc
acggtcactatagggatcatcgtcatcgccgtggtgacgagtatcgtggtaacatcactg
gtgtgggtatgcatcatctaccagacaaggaagaagagtgaggagtgcagtgtcaccaac
acagatgagaccatagttcctccagatgtgcccagttacctctcctcccagggcactctg
tccgagcggcaggatgtgtgtatccgcgtggaggccggcggtggacctcagcccaacgga
cacatcgtagacaccacaggttatgacggtgcagtagtgtgtacagattgtatggagaac
agcagcagctactccaaagatcccgactacctgacacacagcttcggccctgttggaggc
atggagtatcagcagcactctgttcccccgccttactctcactttcacccagtggagcat
cacgaaccagcgtcacacacaaccctgctctgcaatgggacacccaacgggatccggaag
gacattcagggatccacgtttccaaaaaaccacaatacgttacaagggaaccaacaggat
agaaaagcgagcagagcgggacagacgctggcgtgctcgccaccacaggaagagtccttc
cacaagccggtgaagctggccggcgtgacgagccacggcctctccgacactgactgtgag
cctgagctcagacagactctgttgtctaatggacacacccttagagcctctcagaatgag
agcacccccctaaggagagccagcgactag
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