Seriola dumerili (greater amberjack): 111224589
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Entry
111224589 CDS
T05606
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111224589
Enzymes [BR:
sdu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111224589
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
111224589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
GRASP55_65
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
111224589
NCBI-ProteinID:
XP_022604853
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGRDFSKVEHDEAVVEAIRRDPIVVQVLRRTPTRAT
QAVAHNHGGTPQDVCVVDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCHSIHT
MEHEFYECPEYLSNTPAEVERTEEYEYEEVELCRQNSQEKLGLTLCYRTDDEEDTGIYVS
QVEPNSIAARDGRIKEGDRILQINGCEVQDREKAVALLSSEEARSIILLVTRPEIQLEEE
VWLDDEQQELVEELKMEILEERRKQKERNFDRGDENQAEDEITTDTATCSSNNQDSGFGR
STDSPEHQPLLARLHRRSPAHCLRERWRAEHPHTRRGTAVPQDTQSPRTVSKGQGHEGVV
SIRNSGGGVLGLENRFQQLLELKCQIRNGGECGVYSIRHSIECSLTEQGGGDEDCVESVG
EGGGVEQELRMLNEELRSIELECQSIMQAHQLRQSHQLDPSHPAPCSPGRSPKDGRKRHG
RLADIHEHPERSDSDKIREKDSSSAYNTADSARSTPLGMERSPDHSLQRHISITNQKNLR
LVSSTPSSPIPIPKPQGTPSRSRPADPGPVISSSPDQSNPSRSESDPALPADDERCEKKG
RTRESRRGLPYGCSYQTTPYQGQGGSRQLQSYMQLLQQHSSLEYSQSQLSLLSVCRDPVS
RNGRPGEPRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAMSEMK
MGRYWSKEERKQHLARAREQRKRREFMQKSRLECLKEGPASGAEGRKEINILELSHKKMM
KKRNKKILDNWMTIQELMSHGARVPEGSKVHNAFLSVTTV
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcaccttgcagaaacgggaggaacactacaaactgctgtatgag
attgcacaggtgaacgggcgcgacttctccaaggtcgaacatgacgaggcagtggtggag
gccatcaggcgagaccccatcgttgtccaggttctccggcgaacccccaccagagccacg
caggctgttgcacataaccacggtggcacgccacaggatgtgtgcgttgtcgacgtttgc
acgcaaacagacatcacttttgagcacatcatggcactggccaagcttcggcctgctacc
ccacccgtccctgacatctgtcccttccttttgtctgacagctgtcattccatccacacc
atggagcatgagttttatgaatgtccagagtatctgtccaacaccccagcagaggtggag
aggactgaagagtatgagtatgaggaggtggagctgtgcagacagaacagccaggagaag
ctcggcctgacgctgtgctacaggaccgacgatgaggaggacaccggcatctatgtcagc
caggtggagccaaacagtatagcagcgagagatggccgcatcaaggaaggagatcgtatt
ctacagataaatggatgtgaggtgcaagacagagagaaagctgttgccttgttgtcaagt
gaagaagcaaggagcatcatactactggtgacaagaccagaaatccagctggaggaggag
gtatggctggatgacgagcaacaggagcttgtggaggagctgaagatggagatcctggag
gagaggaggaagcagaaagaacgtaactttgacaggggagatgagaatcaagctgaagac
gagatcacaaccgacacagctacctgctcctccaataatcaagacagcgggtttggacgc
agtacagacagtccggagcaccaacccctgctggccagacttcacaggaggagcccggcc
cattgcctgagggagcgatggcgggcagagcatccgcacacaagacgagggactgcagtg
ccacaggacactcagagtccgaggacagtgtccaaaggccaaggtcatgagggggtagtc
agtattcgcaatagtggaggtggggtcctcggtttagagaatcgcttccagcaacttctg
gagctcaagtgtcaaatccggaatggaggcgagtgcggggtgtactccatccgacacagt
atagagtgtagcctcactgagcagggaggaggggatgaagattgtgtggaaagtgtggga
gaagggggaggggtggagcaggagttgaggatgctaaatgaggaactgcgcagcattgag
ctggagtgtcagagcatcatgcaggcacaccagctccgccagagccaccagctggacccc
tcacatcccgcaccctgctcaccaggacggagccccaaagacggacgcaagcggcacggc
aggctggccgacatccacgaacacccggagaggtcggacagcgataagatcagagagaag
gacagctccagtgcctacaacacagcggacagcgcgcggtcaacaccgctgggtatggag
agatctcctgaccactctctgcagagacatatcagcatcaccaaccagaaaaacctcaga
ctggtgtcttccacaccctccagccccatccctatccccaagccccagggtacacccagt
cgtagcagaccagcagacccaggccccgttatctccagcagcccagaccagagcaaccct
tccaggtctgagtcagaccccgccctgcccgcagacgatgagaggtgtgagaagaaaggg
aggacaagagagtccaggagagggcttccctatgggtgttcatatcaaacaaccccctat
caaggccaaggaggatcaaggcaactgcagagctacatgcagctgctacaacagcactca
tccctggagtattcccagagccagctgagtctgctcagcgtctgtcgagatcctgtgagc
cgaaacggacgccctggggaaccccgtctagagtggaaagtcaaagtccgcgctgacggc
acgcggtacgtggcccggaggcctgctcgtgaccgcatcctgagggagagggcgctgagg
atccgagaggagaggagcggaggcatgaccacagacgatgacgccatgagtgagatgaag
atgggccgctattggagcaaagaggagaggaagcagcatttggcacgagccagggagcag
aggaagaggagggagttcatgcaaaagagccgtctcgagtgtttaaaggagggaccagcc
agcggagccgagggcaggaaggagatcaatatcttagagctgagtcacaaaaagatgatg
aagaaacgcaacaaaaagatccttgacaactggatgaccatccaggagctgatgagccat
ggggccagagtcccagaggggtctaaagtacacaacgccttcctgtctgtcacaactgtc
taa
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integrated database retrieval system
