Seriola dumerili (greater amberjack): 111233296
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Entry
111233296 CDS
T05606
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111233296
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111233296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_10
zf-RING_6
PRP1_N
Y1_Tnp
LMBR1
DUF2383
Prok-RING_4
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
111233296
NCBI-ProteinID:
XP_022616794
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MAQKADQLDRETFSCSICLDLLKDPVTIPCGHSYCMNCIKSFWDEEDEKRIHSCPQCRQT
FTPRPVLGKNTMLAALVEQLKKTGLQAAAADHCYAGPEDVACDVCTGRKLKAVKSCLVCL
VSYCENHLQPHYEAAPLKKHKLVEPSEKLQENICSRHDEVMKMFCRTDQQCICYLCPVDE
HKGHDTVSAAAERTERQRELQLRRQEIQQRIQDREKDVKLLQQEVEALNGSADEAVEDSE
KIFTELIRLMEKRRSDVKQQIRSQQETEAGRVKELQEKLQQEIAELKRKDAELKQLSHTE
DHNHFLHNYPSLSRLSDSTDSSSINIFPLRYFEEVTAALSQLREKLQDVLTETWTNISLT
VTEVDVLLSQPEPRTRAGLLKYSQEITVDPNTAFTWLLLSEGNRKVKFTFKQQSYPDHPE
RFITYCQVLSRESLTGRCYWEVEWRRGVCVAVSYKNISREGRESLFGYNDKSWALYCDQN
TFSFRFNSIKTPVSGPQSSRVGVYLDHTAGVLSFYSVSETMTLLHRVQTTFTQPLSAGLR
LYNRGGTAELCKVK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaagcagatcagctggaccgggagaccttctcttgttccatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgaactgtattaaa
agcttctgggatgaagaggatgagaagagaatccacagctgccctcagtgtaggcagacc
ttcacaccgaggcctgtcctggggaaaaacaccatgttagcagctttagtggagcagctg
aagaagactggactccaagctgctgctgctgatcactgctatgctggacctgaagacgtg
gcctgtgatgtctgcactgggaggaaactgaaagctgttaaatcctgtctggtttgtctg
gtctcttactgtgagaatcacctgcagcctcattatgaagcagctccattaaagaaacac
aagctggtggagccctccgagaagctccaggagaacatctgctctcgtcacgatgaggtg
atgaagatgttctgccgcaccgatcagcagtgtatctgttatctctgccctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctc
cagctgaggcgacaagagatccagcagagaatccaggacagagagaaagatgtgaagctg
cttcaacaggaggtggaggctctcaacggctctgctgatgaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctcatggagaaaagacgctctgatgtgaagcagcag
atcagatcccagcaggaaactgaagccggtcgagtcaaagagcttcaggagaagctgcag
caggagatcgctgagctgaagaggaaagacgctgagctgaagcagctctcacacacagag
gatcacaaccactttctacacaactacccctcactgtcacgactcagcgactctacagac
tcatccagcatcaatatctttcctctgagatactttgaggaggtgacagcagctctgtca
cagctcagagagaaactacaggacgtcctgacagagacatggacaaacatctcactgaca
gtgactgaagtggatgttttactgtcacaaccagagcccaggaccagagctggattatta
aaatattcacaggaaatcacagtggatccaaacacagctttcacatggctgttattatct
gagggaaacagaaaagttaaatttacgttcaaacaacagtcttatcctgatcatccagaa
agattcattacatattgtcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtggagtggagaagaggagtttgtgtagcagtctcatacaagaatatcagcagagaa
gggagggaaagtttatttggatataatgacaaatcttgggcattatattgtgatcaaaac
actttttcatttaggttcaacagcatcaaaactccagtctcaggtcctcagtcctccaga
gtaggagtgtacctggatcacacagcaggtgttctgtccttctacagcgtctctgaaacc
atgactctcctccacagagtccagaccacattcactcagcctctctctgctggacttcgg
ctttataatagaggaggcacagcagagttgtgtaaagtgaaatag
DBGET
integrated database retrieval system
