Seriola dumerili (greater amberjack): 111233816
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Entry
111233816 CDS
T05606
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111233816
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111233816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
zf-RING_6
U-box
Gp58
UvrD-helicase
MRP-S31
LMBR1
Motif
Other DBs
NCBI-GeneID:
111233816
NCBI-ProteinID:
XP_022617441
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MAQKGVQLDLEILSCSICLDLLKDPVTIPCGHSYCINCIKSFWEEEDQKKIHSCPQCRQT
FEQRPVLVKNTMLAVLVEELKKTGLQAAPADHCYAGPEDVACDFCTGRKLKAFKSCLVCL
ASYCEKHLQPHYDVAPLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELQLRRQQIQQRIQDRDKDVKVLQQEVEAINGSADKAVEDSE
KIFTELIRLMEKRSSDVKQQIRSQQKTEVSRVKELQEKLEQEITELKRKDAELKQLSHTE
DHNQFLHNYPSLSRLSESTDSSSINIRPLSYFEDVTAAVSQLRDKLQDILRDTWTNISLT
VTEVDVLLSQPEPRTRADFLKYSQEITLDPNTAHTLLLLSEGNRKATLMSQHQSYSSHTD
RFTTCEQVLSRESLTGRCYWEVEWRGRVGVRVAVAYKNISRSGSSNESGFGHNDKSWALN
CNQNSYTFCYNKIKTPVSGPQSSRVGVYLDHRAGVLSFYSVSETMTLLHRVQTTFTQPLY
AGVRFPLNMWIDCNGYSAELCKLK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggacctggaaatcttgtcttgttcgatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatcaactgtattaaa
agcttctgggaagaagaggatcaaaagaaaatccacagctgtcctcagtgtaggcagacc
ttcgaacagagacctgtcctggtgaaaaacaccatgttagcagttttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatttctgcactgggagaaaactgaaagccttcaagtcttgtctggtttgtctg
gcctcttactgtgagaaacacctgcagcctcattatgatgtagctccattaaagaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcatgatgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggatgaa
cataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctc
cagctgaggcgacaacaaatccagcagagaatccaggacagagacaaagatgtgaaggtg
cttcaacaggaggtggaggctatcaatggctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaagcagcag
atcagatcccagcagaaaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagcagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgtcacgactcagtgaatctacagac
tcatccagcatcaatatccgtcctctgagctactttgaggacgtgacagcagctgtgtca
cagctcagagataaactacaggacattctgagagacacatggacaaacatctcactgaca
gtgactgaagtggatgttttactgtcacaaccagagcccaggaccagagctgacttctta
aaatattcacaggaaatcacactggatccaaacacagcacacacacttctgttattatct
gagggaaacagaaaagcaacattaatgagtcaacatcagtcttattctagtcacacagac
agattcaccacatgtgagcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtggagtggagaggaagagtaggagttcgtgtagcagttgcatacaagaatatcagc
agatcagggagctcgaatgaatctggatttggacataatgacaaatcttgggcattaaat
tgcaaccaaaacagttatacattttgttacaacaaaatcaaaactccagtctcaggtcct
cagtcctccagagtaggagtgtacctggatcacagagcaggtgttctgtccttctacagc
gtctctgaaaccatgactctcctccacagagtccagaccacattcactcagcctctctat
gctggagttcggtttcctcttaatatgtggattgattgtaatggatactctgctgagttg
tgtaaactcaaatag
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