Seriola dumerili (greater amberjack): 111233872
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Entry
111233872 CDS
T05606
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111233872
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111233872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
SPRY
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
zf-RING_5
zf-B_box
zf-RING_10
zf-RING_6
GalP_UDP_transf
C5HCH
Gp58
zf-RING_11
DUF4192
LMBR1
MRP-S31
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
111233872
NCBI-ProteinID:
XP_022617495
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MAHKGVQLDRESFSCSICLDLLKDPVTIPCGHSYCMNCIKSFWDEGDEKKIHSCPQCRQT
FTPRPVLVKSTMLAVLVEELKKTGLQAAAADHCYAGPEDVACDVCTGRKLKAVKSCLMCP
ASYCEKHLQPHYEAAPLKKHKLVEPSKKLQENICSRHDEVMKMFCRTHQQYMCYLCPADE
DKDEQNDTVSAAAERTERQRELQLRRQQIQQRIQDREKDVKVLQQEVEAINGSADKAVED
SEKIFTELIRLMEKRSSDVKQQIRSQQETEVSRVKELQEKLEQEITELKRKDAELKQLSH
TEDHNQFLHNYPSLSRLSESTDSSSINIRPLSYFEDVTAAVSQLREKLQDILTWTNISLT
VTEVDVSLSQLEPKTRAEFLNYSQDITLDPNTANRHLLLSEGNRKATRSQQQSYSSHPDR
FTSYFQALSRESLAARCYWEVETRGGVYVAVAYKNISRAGSLDECIFGSNDKSWALHCDQ
NSYTFFYNNIRTPVSGPRSSRVGVYLDHRAGVLSFYSVSETRTLLHRVQTTFTQPLYAGV
RIYSDYGDTAEFCKLK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgcataaaggagttcagctggaccgggagagcttctcttgttcgatctgtctggat
ctactgaaggatccggtgactattccctgtggacacagctactgcatgaactgtattaaa
agcttctgggatgaaggggatgagaagaaaatccacagctgtcctcagtgtaggcagacc
ttcacaccgaggcctgtcctggtgaaaagcaccatgttagcagttttagtggaggagctg
aagaagactggactccaagctgctgctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagctgtcaaatcctgtttgatgtgtcca
gcctcttactgtgagaaacatctgcaacctcactatgaagcagctccgttaaagaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcatgatgaggtg
atgaagatgttctgccgcactcatcagcagtatatgtgttatctctgccctgcggatgaa
gataaagatgaacaaaacgacacagtctcagctgcagcagaaaggactgagaggcagaga
gagctccagctgaggcgacaacaaatccagcagagaatccaggacagagagaaagatgtg
aaggtgcttcaacaggaggtggaggctatcaatggctctgctgataaagcagtggaggac
agtgagaagatcttcactgagctgatccgtctcatggagaaaagaagctctgatgtgaag
cagcagatcagatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaag
ctggagcaggagatcactgagctgaagaggaaagacgctgagctgaagcagctctcacac
acagaggatcacaaccagtttctacacaactacccctcactgtcacgactcagtgaatct
acagactcatccagcatcaatatccgtcctctgagctactttgaggacgtgacagcagct
gtgtcacagctcagagagaaactacaggacattctgacatggacaaacatctcactgaca
gtgactgaagtggatgtttcactgtcacaactagagccaaagaccagagctgaattctta
aattattcacaggatatcacactggatccaaacacagcaaacagacatttgttattatct
gagggaaacagaaaagcaacacgtagtcaacaacagtcttattctagtcacccagacaga
ttcacttcatattttcaggccctgagtagagagagtctggctgcacgttgttactgggag
gtggagacgagaggaggagtttatgtagcagtcgcatacaagaatatcagcagagcaggg
agcttggatgaatgtatatttggaagcaatgacaaatcttgggcattacactgtgatcaa
aacagttatacattcttctacaacaacatcagaactccagtctcaggtcctcggtcctcc
agagtaggagtgtacctggatcacagagcaggtgttctgtccttctacagcgtctctgaa
accaggactctcctccacagagtccagaccacattcactcagcctctctatgctggagtt
cggatttactctgattatggagacacagctgagttctgtaaactcaaatag
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integrated database retrieval system
