Seriola dumerili (greater amberjack): 111235187
Help
Entry
111235187 CDS
T05606
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111235187
Membrane trafficking [BR:
sdu04131
]
Protein recycling
Others
Others
111235187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
111235187
NCBI-ProteinID:
XP_022619249
LinkDB
All DBs
Position
Unknown
AA seq
1231 aa
AA seq
DB search
METRLGYCLFIIFSEWIWLFTLTSILGGTKAEVRCIPSCQLPLVTAFPRELSAQDLDHFG
EAPAEEFVGFNEGSPGAKPSASGDEKHNVAELTASEESSSKVQSRLRGNKTSCLQKDVLN
GQQKLSHSKVFPRAGDAKNNSFYGENGAQADVTVNEDKDVASWRRTRRSAETWSGFRAEG
GDEASFSDQEEFQLTSSTFALSGDTAHNQAMVHWSGQNSSVILMLTKYYDFNSGRVTESS
LWRSTDYGTTYEKLNEKVGPKTILSYLYVSPNNKRKIMLLTDPEVESSLLISLDEGASYQ
KHSLAFDILSLLFHPEQEDWILAYSHDQKLYVSVEFGRRWQLVHDGVVPNRFYWSRLGLD
KEQGMIHLEISVSDGRSQYITCKLQNCSDGNKGKPFPGFIIPNSLVVQDEYVFIQVPIGG
QSVHYVSYKRNAFYPMKLPKYTLPKDLQIISTDDNQVVAAIQDWHQNDSYNLYMSESRGL
LFTLMLENVVSSGGPEGNIMIDLYEVAGIKGVFLSNKVVENQVKTYITYNKGRDWHLLQA
PTTDLQGNKVYCEQPFCSLHLHLHVSENPYTSGNIVSKDSAPGIIIASGVVGPELTSTNV
SIFITSDAGNTWREVFQEEYSVFFLNQGGSLVAIRHTPLPIRHIWLSFDEGRNWDKYSFT
SSPLYVDGVLGEPGEDTLIMTIFGHFSHRSEWQLVKIDFRSIFQQWCTSEDYLTWQLHSE
GEVCIMGMKRIFQKLKANVRCVKARDQYISQMSDSCPCTEADFECDYGFERQIDGSCTPA
FWFVPSAASRDCITGDSFLNTTGYRKALSNNCTEGTLLKYSPRRQKCPSQVPRGLQLFTS
EGTLVATLGRNVTFLVFLEEGLGSTTSITVDFGDGTAISYVNISSIDDGVKHIYSKVGIY
QVSATASNTLGFDRVILYLHISCQLEQVQLSAPSVVVKNKAVNLTTVLQPSNVGTVIYYW
WFDNKTEPIVTLEGAMSFTFSKEGSHSVTVQASVGNTVHQDQMTVAVYDYFRSHVLAFSS
NLDEMNPGVSEWREDICRVVKSSMVQVTGISEDQLLVTVLPGLPTTAEVFIVPEKRSRDG
ATDEKWAHLDQLSQVLLSALNQDLIQFTLKPGVQVNVYATRLSPAPLVDSSDSGHSGTAV
IMLVSVVLMGLAVFVIYKFKRKIPGINTYTAEQPDKEQEVIPTVTSIAVPNPEGEKLTSL
DHVDVQLDSKSRGYLPSHTDIKLSDEAPHVF
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcgcctcggttactgcctttttatcattttctctgagtggatttggctcttc
accctaacttccatcctgggcggaacaaaagcggaggtgaggtgcattccctcgtgccag
ctgccgctagtcacagcgtttccccgggaactctcggcgcaggatttggatcattttggc
gaggcaccagcagaagaatttgttggatttaacgaggggtcaccgggcgccaaacccagc
gccagcggggacgaaaagcacaacgttgcggaattaaccgcgagcgaagaaagttcgtcc
aaagtacagtcacggttgcggggaaataaaacaagttgcctccagaaggacgtgttaaac
ggccaacaaaaactttcccactccaaagtgtttcctcgcgccggtgatgcaaaaaacaac
agcttttatggagaaaatggggcgcaggctgatgtgacggtgaacgaggacaaggatgtg
gccagttggagacgaacacggaggagcgcagagacttggtccggattcagagccgagggc
ggggatgaggcttcgttttcggaccaggaggagtttcagctcacaagttcgacatttgca
ctgagcggggacacggctcataaccaggcgatggtgcactggtccggacagaacagcagc
gtgatcctcatgttgacaaaatactacgacttcaactctggcagagtaacagagagttct
ttatggaggtcaactgattatgggaccacatatgagaaacttaatgagaaagttgggcca
aaaaccatactgagctacttgtacgtaagtccgaacaacaaaaggaagatcatgttactg
accgacccggaggtggagagcagcctgctcattagtcttgacgagggggcgtcctatcag
aaacacagcttagcctttgatatcctcagcctgctttttcacccggagcaggaggactgg
attttggcttacagccacgaccaaaagctctatgtctctgttgagtttgggaggaggtgg
cagcttgtgcatgacggcgtcgtccccaacagattctactggtccaggctgggtttagat
aaagagcaaggaatgattcatctggagatcagtgtctctgatggacggtcacagtacata
acttgtaaacttcagaactgctctgacggaaacaagggcaagcctttccctggatttatc
atccctaattccctggtggttcaggatgaatacgttttcatccaggtgccaataggtggc
cagtctgtccattatgtgtcctataaaagaaatgctttctacccgatgaagcttcctaag
tacactctgccaaaggacttgcagataatcagcacagacgataaccaggtggttgcagca
attcaggactggcaccagaatgactcctacaacctgtacatgtctgagtccagaggactg
ctgttcaccctgatgctggagaatgttgtgagcagtggaggacctgagggcaacatcatg
atagacctgtatgaggttgcagggattaaaggggtgttcctgtcaaataaagttgttgag
aaccaagtgaaaacttatatcacatacaacaaggggagagactggcatcttcttcaggct
ccaacaaccgatctccagggaaacaaggtctattgtgaacaaccgttctgttcgttacat
ctgcaccttcatgtgtcggagaatccttacacctcgggaaacattgtcagcaaagactca
gctccaggaattataatagcatcgggtgtggttggacctgagctgaccagtactaatgtc
agtattttcatcacatctgatgctggaaatacctggagagaggtttttcaggaggagtac
agtgtgtttttcctgaatcaaggaggatctcttgtggccatccgacacacacctctgcca
attagacatatttggctgagttttgatgagggcagaaactgggacaaatatagcttcacc
tcctctccgctctatgttgatggggtgctgggggagcctggagaggacaccctcatcatg
acaatatttggtcatttcagtcatcgatccgagtggcaacttgtcaaaattgacttccgg
tccattttccaacaatggtgcacatctgaagattatctgacatggcagttacacagtgag
ggggaagtgtgcatcatgggaatgaagagaatcttccaaaaactgaaagcaaacgttcga
tgtgtcaaggccagagatcagtatatttcccagatgtcagactcttgcccatgcacagag
gcagattttgagtgtgactacgggtttgagaggcagattgatgggagctgcactccggct
ttctggttcgttccttcagcagcgtctagagactgcatcacgggggacagcttcctcaac
accacaggatatcgcaaggctttgtctaacaactgcaccgaaggaactctgctgaaatac
agccccaggcgacagaagtgtcccagtcaggtccccaggggcctccagctcttcaccagc
gagggaaccctggtagcgacgctggggaggaatgtcaccttcttggtctttctggaagag
ggtcttggctccacaacgagtataacagtggacttcggcgacgggaccgcaatatcatat
gttaacataagctccatcgatgacggggtcaagcatatctacagtaaagttggcatctac
caagtttctgcaacagcaagcaacactcttggctttgacagggtgatactgtaccttcac
atctcctgtcaacttgaacaggtccagctctcggctccttcagtggtcgtcaagaacaaa
gcagtaaatctcaccacagtgttacagcccagcaacgtggggacagtcatctattactgg
tggtttgataacaaaacagagcctattgtcaccctggaaggagcgatgtccttcactttc
tccaaggagggaagccacagtgtcactgttcaggcttcagttggcaacactgtccatcag
gaccaaatgactgtggcagtttatgattatttccggtcacatgttttggccttttcttct
aatttggacgagatgaaccctggggtgtctgagtggagagaggacatctgcagagtggtg
aagagctccatggttcaggtcacaggaatcagtgaggatcagctcctggtcaccgtgcta
ccgggcttaccaaccacggccgaggttttcattgtgcctgagaagaggtcaagagatgga
gccacggatgaaaagtgggcccacctggatcagctttctcaggttctgctaagtgctctg
aaccaagacctcatccagttcacactcaaaccgggggtgcaggtgaacgtgtatgccacg
cggctgtctccggctcctcttgtggacagcagtgatagtggccacagcggcactgcagtc
atcatgctcgtctcagtcgtactgatgggcttggccgtctttgtaatatataaatttaaa
aggaagatcccaggcatcaacacatacacagcggagcagcctgacaaagaacaagaggtc
atcccaacagtgacctccatagcagtcccaaaccctgagggggaaaagctgacctcactg
gatcatgtggatgtacagttggactcaaaaagcagaggctacctgccatctcacacagac
atcaagctctctgatgaagcgccccatgtgttttaa
DBGET
integrated database retrieval system
