Seriola dumerili (greater amberjack): 111236113
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Entry
111236113 CDS
T05606
Name
(RefSeq) nuclear factor 7, brain-like
KO
K12012
tripartite motif-containing protein 35
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111236113
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111236113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
zf-rbx1
Prok-RING_4
DUF4618
zf-RING_6
zf-Nse
PEHE
zf-ANAPC11
Fib_alpha
PIN_8
HSP70
DUF1444
DUF3450
Motif
Other DBs
NCBI-GeneID:
111236113
NCBI-ProteinID:
XP_022620445
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MAFRPEEDLCCPVCHEVFRDPVVLSCSHSFCKDCLQSWWREKPGRLCPACKRRSSKSKPP
CNLVLKNLCEAFLQERDHGSSEALCSLHSEKLKLFCLDHQQPVCLVCRDSEKHTDHRFRP
IDEAAPQHKKKLQETLEPLKEKLKGLNEVKVEFDQTAEHIKVQARRTETQIKEQFKKLHQ
FLEEEEEARMAALREEEEQKSQVMKEKMEALSREIAALSDTVRATEDELRAEDVSFLLSY
KAAVDRVQQRPLLEDHQLGSGALIDQAKHLGNLTFNIWNKMKDVVSYSPVVLDPNTAGPE
LILSEDLTRVRRGERQKLPDNPERISSYSWSVLGSEGFNSGTHSWDVEVGDNTFWRLGVL
EESVQRKRDIWSGLWVIWFDEGKFSAESPSAPVIDLSVKKKKLQRIRVNLDWNRGKLSFS
DPDTDTHIHTFTHTFTHKVFPFIYTEDEVKVLPLKVSVTVGQSS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggctttcagaccagaggaggatctctgctgtccggtctgtcatgaggtcttcagagat
cctgttgttctgtcctgcagccacagcttctgtaaagactgtctgcagagctggtggaga
gagaaaccaggtcgactgtgtccagcttgtaagagaagatcttcaaagtctaaaccacct
tgtaacctggtgttgaagaacctgtgtgaggccttcttacaggagagagatcatggatct
tcagaggctctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcag
cagccagtgtgtctcgtctgtagagattcagaaaaacacaccgaccacagattcagaccc
atcgatgaagctgctccacaacacaagaagaagcttcaggaaactctggagcccttaaag
gagaagttaaagggtcttaatgaagttaaagtggagtttgatcaaacagcagaacacatt
aaggtccaggcccgacgcacagagacgcagatcaaggagcagtttaagaagcttcaccag
tttctagaagaggaagaggaggccaggatggctgcactgagggaggaagaggagcagaag
agtcaggtgatgaaggagaagatggaggctctgagcagagagatagcagctctttcagac
acagtcagagccacagaggacgagctgagagctgaagacgtctcattcctgctcagctac
aaggctgcagtggacagagtccagcagcgccccctgctggaggatcaccagctgggctca
ggagctctgatagaccaggccaaacacctgggcaacctgaccttcaacatctggaacaag
atgaaggacgtggtctcctacagtcctgtggttctggacccaaacactgctggtccagaa
ctcatcctgtctgaagatctgaccagagtgagacgaggagagagacagaagcttcctgac
aatccagagaggattagttcttactcctggtctgtcctgggctctgagggttttaactca
gggactcacagctgggacgtcgaggttggagacaatacattctggagactgggagtgtta
gaagagtctgtccagaggaagagagacatatggtctggattatgggtaatatggtttgat
gaaggtaaattctcagcagagtcaccatcagctccagtcattgatctctcagtgaagaag
aagaagctccagaggatcagagtgaatctggactggaacagaggaaaactgtcgttctct
gatcctgatactgacacacacatacacaccttcacacacactttcactcacaaggtgttt
ccattcatttacactgaggatgaagtgaaggtgttaccactgaaggtctctgtgacagtg
ggacagagcagttag
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