Seriola dumerili (greater amberjack): 111236550
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Entry
111236550 CDS
T05606
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdu01002
]
111236550 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111236550 (usp47)
Enzymes [BR:
sdu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111236550 (usp47)
Peptidases and inhibitors [BR:
sdu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111236550 (usp47)
Ubiquitin system [BR:
sdu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111236550 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
111236550
NCBI-ProteinID:
XP_022621046
LinkDB
All DBs
Position
Unknown
AA seq
1367 aa
AA seq
DB search
MEMVPSEENQFVPKEIQNAAEEPRVLCIIQDTTSAKTVNERLTLNLPASTTLSRLYEDVA
HKAGYVNGTFDLAWGNIPDMAPLDHNSEMSLSDSGFEPGGKRNFLQLTDKDGEQPQMASD
ESGTADSSGLDDSSQERFIGPLPREGTAGCSGDYSSPSYSYSSILNKSETGYVGLVNQAM
TCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTD
VTRSFGWDSSEAWQQHDIQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECG
YESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARK
GLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDVEDEKSPQTESCT
DSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTGSTERVLKPKSLLTFELFSVMVHSGS
AAGGHYYACIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYM
LIYRLKDPSRNAKYLAVDDFPEHIKSLVQKEKESEEQEKRQREIERNTCKIKLFCMHPVK
MMMESKLEVHKDKTLREATEMAYKLMELEGVVPLDCCRLVKYDEFHEYLERSYEGEEDTL
MGLLLGGVKSSYMFDLLLETRRPEQVFQPYKPGEVMVKVHVVDLKSETIASPISVRAYLN
QTITEFKQLIAQATGLSAETMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSES
TDHQVAFTDSVLWKLLDRHGNTIRLLVLLPEQSPGTLANRTLCQKVGGDSDVPFDGAKGN
RKSVEAILEESTEKLKNLSLQQQQQGSSTSTSDSQKSSDASDFEHIESPTQEADSNSSLC
MAADNRELENRIRATAGTSGGASSDPENHFACEERSDSEVNNDRSTSSVDSDILSSSHSS
DTLCNADSGPIQLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDDNGKSKAE
AQYLYFRAEPCSQDDSSWDAQKCLVVHVDKRITLAAFKQNLEPYVGVTSTQFKVFRVYAN
NQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLVDTVFAK
GMTVRQSKEELLPQLKEQCKLDLSIDRVRLRKKTWKNPGTVFLDYHVYEEDISISSNWEV
FLEVLNEPEKMKSMSQLAILTRRWSPATMKLGPFQEVILESSSVEELKEKLSEMSGIPLE
NLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYRDSTEEPMELS
DDERNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPAKDPGQD
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagcgaggagaaccagttcgtacccaaagagatacaaaatgcggct
gaggagcccagagtgctgtgcataatccaggacaccaccagtgcaaagactgtcaatgag
aggctgaccctaaacctacctgcttccaccaccctctccagactttatgaagatgttgcc
cacaaagcaggatatgtaaatggcacctttgaccttgcctggggaaatattccagacatg
gcaccactggaccataacagtgagatgtccctctcagattcggggtttgagcctggtggt
aagaggaatttcctccagcttacagacaaagatggagagcagccccagatggcatcggat
gagtcaggaacagcagatagcagtggactggatgacagttcccaggagcggtttattggg
cccctaccgagagaaggcactgcaggctgcagtggcgactacagtagtccatcttactcc
tactcgtccatcctcaacaaatctgagacaggttatgtgggcttggtgaaccaggctatg
acctgttatttgaacagtcttctacaaactctgttcatgaccccggagttcagaaatgca
ctctacaactgggagtttgaggagtcagaggaagatccagtcaccagtatcccctaccag
ctgcaaaggctgtttgtcctgctgcagactagtaagaaacgggcaattgagaccactgat
gtgacacggagctttggctgggacagcagtgaggcctggcagcagcatgacatccaggag
ctgtgcagggtcatgtttgatgccctggagcaaaagtggaagcagacagagcaggctgac
ctgatcaaccagctgtaccaggggaagctgaaggattatgtccgttgtctggagtgtggc
tatgagagttggaggattgatacttacctggacatccctcttgtgatcagacccttcgga
gccagccaagcctatggcagtgtggaggaggctttgcaggcgttcatccaaccagaaact
ctggatgggcccaaccagtacttctgtgagcgctgcaaaaagaaatgtgacgcccggaag
ggtctgagatttctgcactttccctacctgctgacactacagctgaagcggtttgatttt
gactacaccactatgcatcgcatcaaactaaatgaccgcatgactttccctgaggagctt
gacatgagtccattcattgatgtggaagatgagaagtcgcctcagacagagagctgcact
gacagtggagcggagaatgaaggcagttgccacagcgaccagatgagcaatgatttttcc
actgatgattgtgtggatgagggcatctgcttggacagcaccggcagcacagagagggtg
ttgaagccaaagagtttgctgacctttgagctgttctctgtcatggtccattctgggagc
gctgcgggtggccactactacgcctgcatcaaatccttcagtgatggccagtggtacagt
ttcaacgatcagcacgtgagcaagatcacccaggatgatatcaggaagacatatgggggg
tcctcagggagcagaggctattattccagtgcctttgcaagctctacaaatgcatatatg
ctgatttatagattgaaagatccctcaaggaatgcaaagtatttagctgtggacgacttc
ccggagcacataaagagtttggttcagaaggagaaagagtctgaagaacaggaaaaaaga
caaagggagattgaacggaatacctgcaagatcaagcttttctgcatgcatcccgtaaag
atgatgatggagagcaagctggaagtgcacaaggacaaaactctcagagaagcaacagag
atggcctacaagctgatggagctggagggtgtcgtccctttggactgttgtcgcttggtc
aagtatgacgagttccacgagtacctggagcgctcctatgaaggtgaggaggacacactg
atgggtctcctgctgggaggagtcaagtcctcgtacatgttcgacttgctgctagagacc
cgccggccagagcaagtgttccagccttacaaacctggagaggtgatggtgaaggttcat
gttgtggatctgaagagtgagaccatcgcctctccaatcagtgttcgggcgtacctgaac
cagacgatcactgaattcaaacagcttattgcacaggctacagggttatctgcagaaacc
atgcgtgtggtcctggagcgctgctacaatgaccttcggctcctctatgttccaaacaag
acactgaaagctgagggattcttcaggagtaacaaggtgtttgtagagagctctgagtcg
actgatcatcaggttgctttcacagactcagtcttgtggaaactgttggaccgtcacggg
aatacgatccgactcttggtcttactgcctgaacagtctcctggtaccttggccaacaga
actctttgccaaaaagtgggaggtgactctgatgtgccctttgatggagcaaagggtaac
aggaaatccgtagaagctatactcgaggagagcacagaaaagttaaagaatctgtctctg
cagcagcaacagcagggctccagcaccagcaccagcgacagccagaaaagttctgatgcc
agcgactttgaacatatcgagtccccaacccaagaggctgactcaaactcttcactctgc
atggccgcagacaacagagagttagagaaccggatcagggccacagctgggaccagcggt
ggggcctcctctgacccggagaaccactttgcctgtgaggagcgctcagactctgaggtg
aacaatgaccgcagcaccagctcagtggacagcgacatcctcagctccagccacagtagt
gacacactgtgtaacgcagacagcggtcccatacagctggccaacggcctggactcgcac
agcatcacaagtagccgacgctccaaagcccatgagggcaaaaaagagacctgggacact
gctgaagaggactctggaacagacagcgagtacgacgacaatgggaagagcaaggcggag
gctcagtacctgtacttcagagcagaaccttgttctcaggatgactcctcttgggatgca
caaaaatgtttagtagttcatgtggacaagagaataacattagcagcatttaaacagaac
ctggagccctatgtaggagtgacctcgacccagttcaaggtgtttcgggtgtacgccaac
aaccaggagtttgagagtgtacggctcaatgaaacactttcatcgttctctgacgacaac
aagataaccattcgactaggaagagcactgaagaagggtgaatacagagttaaagtgtat
caactactagtgaatgaaccagagccctgcaaattcctagtggacacggtgtttgccaag
ggcatgactgtcagacagtcaaaagaggagctgcttcctcagttgaaagagcagtgcaag
cttgacctcagcattgacagggttcgtctcaggaaaaagacatggaagaacccaggcaca
gtgtttctggattaccatgtctatgaggaagacatcagcatctcctccaactgggaagtc
ttcctggaagtcctaaatgaaccagagaagatgaagtccatgtcgcagctggctattctg
acacggagatggagcccggctacaatgaaactagggccttttcaggaagtgattcttgag
agcagcagtgtagaagaactcaaggagaagcttagtgaaatgagtggtattcctcttgaa
aacctggagtttgcaaagggtaggggaacgtttccttgtgatatttctgtgttggagatc
catcaggacttggactggaaccctaaggtgtcaactcttaatgtgtggcctctgtacatc
tgtgatgatggagctgtggtattctacagggatagtacagaggagcctatggagctctcg
gacgatgagcgcaatgagctgatgaaaaaggagagcagccgtctgctcaagactggacac
cgtgtcagctactcaccacgcaaggagaaagccctcaagatctacctggacggaggccct
gccaaggacccggggcaggactga
DBGET
integrated database retrieval system
