Sulfitobacter dubius: R1T39_03270
Help
Entry
R1T39_03270 CDS
T09506
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sdub
Sulfitobacter dubius
Pathway
sdub01501
beta-Lactam resistance
sdub01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sdub00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R1T39_03270
01503 Cationic antimicrobial peptide (CAMP) resistance
R1T39_03270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdub02000
]
R1T39_03270
01504 Antimicrobial resistance genes [BR:
sdub01504
]
R1T39_03270
Transporters [BR:
sdub02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
R1T39_03270
Antimicrobial resistance genes [BR:
sdub01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
R1T39_03270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Patched
SecD_SecF
Ilm1
Motif
Other DBs
NCBI-ProteinID:
WOI29739
LinkDB
All DBs
Position
complement(653982..657089)
Genome browser
AA seq
1035 aa
AA seq
DB search
MARFFIHRPVFAWVLAIATMLLGAFSMTGLPISQYPDIAPTTVRISATYTGASAATVENS
VTTVIEDGLTGLDGLTYMTSSSSEGAASVSLTFDDSIDPDMAQVQVQNKLQLVESQLPDA
VTSRGVSVTRSTSSILMVGALVSEDGSYTSLELGDLLSSTIEDAVQRTAGVGSINVFGTE
YAMRIWLNPEKLFQYQLTSADVTSAVSEQNTNVTVGSLGEQPVVKGQQFTVSLSAQSQLG
TVEDFRNILLKTNSDGSAIYLADVATIELAEEDYGSVSRFNGHPAAGFAVNLSTGANAVD
TAEAVRDVVGNLSSALPEGVVVEYPYDTSPFVEESIDQVYETLIEAIVLVFLVIFLFLQS
WRATIIPTIAVPVVLLGTFGVLSAFGMSINTLSMFALVLAIGLLVDDAIVVVENVERVME
EEGLDAVAATEKSMGEISSALIGIVMVLSAVFLPMAFMDGSTGVIYKQFSVTIISAMVLS
LFVALILTPAMCAQLLKPNHDKKPLLPLRWFNGGLDRLTGGYASLVGRLSMRPFRMVVVL
ALVGFGAYWVYDRLPSSFLPTEDQGVLMTMIELPQGSTVQQTANTIEQIEQYLLTEETEM
VDGVFANVGFSFGGSGQNYGMMFIRLKDYEERPGLDAADLMMRANGKFFQSRLGSIFVLQ
PPAIPGLGTSSGFAMYLVDQSGAGQEALSDAADKLVAAGLADGRVTNLRGNDAATEPSLK
LRIDQQKAEALGVSLSSVNTMLATVFSGTYVNDFPLGNNLREVIVQGGADWRMQPDDIDH
WYVRNDSSEMVPLSAFVSREWETITPKLSRYGGTRALELSGEAAAGISSGDAMEVMEQLT
ADLDGSYASAWTGLSYQERLSGDQEAILYTISALVVFLCLAALYESWAVPFAVMLSVPVG
ILGALVTTWYFGQSNDVYFKVGLLTTIGLAARNAILIVEFAESLRAEGKVLLEATVMAAR
QRLRPILMTSLAFGFGIMPLVLASGAGANAQKSVGTGMLGGIIFSAVIGIVMVPVFYVAV
IRTTEIFRKRVEKTQ
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtttcttcatccaccgtcctgtttttgcttgggttctggcgattgccaccatg
ttgctgggcgctttcagtatgacgggtctgccgatctcgcagtatcctgatatcgcgccc
accaccgttcgaatttccgccacctataccggggcctcagccgcaacggtggagaattcg
gtcaccactgtcattgaggacgggctgacggggttggacgggctcacctatatgacctca
tcctccagcgaaggtgcggcgagtgtatcgctgacctttgatgacagtattgatcctgac
atggcgcaggtgcaggtccagaataaactgcaactggtcgaatcccaactgcctgacgcc
gtgacaagccggggtgtttcggtgacccgctcgaccagctcgatcctgatggtcggagcg
ctggtcagtgaagacggcagctatacctcgcttgaactgggcgacctgctgagcagcacg
attgaagacgcagtgcagcgcacggcgggggtggggtcgatcaatgttttcggcaccgaa
tacgcaatgcgcatttggttgaatcccgaaaagctgttccaatatcaactgacctccgct
gacgtaacctcagccgtatccgagcagaacacaaacgtgacggtcggcagtctgggtgag
cagccggtggtgaaaggccagcagttcacggtctctctttcggcgcagtcccagcttgga
acggttgaggactttcggaacatcctgctgaagaccaactcggacgggtcggccatttac
cttgccgatgttgccacaatcgaactcgccgaagaggactacggcagtgtaagccgcttt
aatggtcatccggcggcgggctttgcggtgaacctttccaccggtgccaatgcggtggat
accgccgaagcggtgcgggacgtggtgggcaatctttcttccgcgttgcccgagggcgta
gtggtcgaatatccctatgacacctcgcccttcgtcgaggaatccatcgaccaagtctat
gaaacgttgatcgaggcgattgtcctcgtctttcttgtcatcttccttttcttgcaaagc
tggcgggcgacgatcatcccgaccatcgccgtgccggtggtgttgttgggaacctttggc
gttttgtccgccttcggcatgtcaatcaacaccctttccatgttcgcattggtcttggcc
attggtctgttggtcgatgacgcgattgttgttgtcgagaacgtcgaacgggtgatggaa
gaagaggggttggacgccgtcgccgctacggaaaagagtatgggagagatttcctcggcg
ctcatcgggatcgtgatggtgctttctgctgtgttcctgccgatggccttcatggatggg
tcgacgggggtcatctacaaacagttctcggtcacgatcatttcggcgatggtgctgtcg
cttttcgtcgccctgatccttacgcctgcgatgtgtgcgcagcttctcaaaccgaaccat
gacaagaagcctctgcttccgctgcgctggttcaatggcgggcttgaccgtctgacgggt
ggctatgcttcgcttgtcgggcggttgtccatgcggcctttccgtatggtggtggtattg
gccctcgtcggatttggagcctattgggtctacgaccgtctgccgtcgtcgttcctgccg
accgaagatcagggcgtgcttatgaccatgatcgaactgcctcagggatcgacagtccag
caaacggccaacacgattgaacagatcgagcagtatttgctgaccgaagagaccgaaatg
gttgatggcgtctttgccaatgtcgggttcagctttgggggttctggtcagaactacggg
atgatgttcatcaggctcaaggactacgaagagcgtcccgggcttgatgcggctgatctg
atgatgcgggccaatggcaagttcttccagtcccgactgggcagcatctttgtgcttcaa
ccgcctgccattccggggctgggtacctcttcaggttttgcaatgtacctcgtcgaccag
tcaggcgcgggtcaggaagcattgagtgatgccgcagataaactggtcgcggcagggctt
gcggacggtcgcgtgaccaacctgcgcggcaacgacgcggccacggagccatcgttgaag
ctgcgtatcgaccaacagaaggccgaggctctgggcgtgtcattgtcgagcgtgaacacc
atgctcgcgaccgtgttttctggcacctatgtcaacgacttccctctgggcaacaacctg
cgtgaggtcattgtacagggcggtgcagactggcgcatgcagcctgatgacatcgaccat
tggtatgtgcgtaacgacagttcggagatggtaccactgtcggcctttgtcagccgcgaa
tgggaaaccatcacgcccaagctgtcgcgctatggcggcacccgcgcactggagctttcc
ggcgaagcggcagcgggcatcagttcgggcgatgcgatggaggtgatggaacagcttacc
gctgatctggacggatcttatgcctcggcttggacggggctgagctatcaagaacggttg
tccggcgatcaggaagccattctctatacgatctcggcgctggtcgtctttctctgtctc
gccgccctctacgaaagctgggccgtgccctttgcggtgatgctttcggtgcccgtgggc
attctgggggcgctggtgacaacgtggtatttcggacagtcgaacgacgtctatttcaag
gtaggtctgcttaccacgatcggccttgcggcgcgaaatgccattctgatcgttgaattc
gcggaatcccttcgggcggaaggcaaagtattgctggaagccaccgtcatggcagcgcgc
cagcgtctgcgccccatcctaatgacctcccttgcctttggttttggcatcatgccgctg
gtgctcgcctccggggcaggggccaatgcgcaaaaatcagtcgggacggggatgctcggc
gggatcatcttttcggcggtcatcgggatcgtgatggtgccggtcttctacgtcgccgta
atccgaacaacagaaattttccgtaagcgagtggagaaaactcagtga
DBGET
integrated database retrieval system
