KEGG   Solanum dulcamara (climbing nightshade): 129870324
Entry
129870324         CDS       T09577                                 
Name
(RefSeq) polygalacturonase At1g48100
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul00040  Pentose and glucuronate interconversions
sdul01100  Metabolic pathways
Module
sdul_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    129870324
Enzymes [BR:sdul01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     129870324
SSDB
Motif
Pfam: Glyco_hydro_28 Retrotran_gag_3 Pectate_lyase_3 Beta_helix End_N_terminal
Other DBs
NCBI-GeneID: 129870324
NCBI-ProteinID: XP_055801037
LinkDB
Position
2:14485429..14506435
AA seq 545 aa
MADNVAAEESGSENYALWSRSFSIRLVGRNKLGFVDEKLGSYLECLLAGGREEERKHYIF
QMKKNYRHFSLVFLFVLLLIFATAFSIISVDARKHHTKKSKIHHKHRKQQRNGGGNKAPN
CSNSPSPAPTPTPTPSHGFYPTQSPIFDILSFGAKGDGVTDDTKALEAAWEAACKVQGAT
LEIPSEFQFLINPITLQGPCMPNFVFQVDGIVLAPPKVGSWPKSSLFQWLNFKWMHNFTI
QGTGTLDGQGYNWWKLSQIDYFQVMKKSKSIPDMKPTVLRFYGSYNVTVRDIKIKNSPQC
HLKFDNSKRIKVNNITISAPESSPNTDGIHLQNTQDVEINHSNIGTGDDCISIQTGCSNI
HVHHMNCGPGHGISLGGLGKDKSVACVSDIIVENVNLQSTMYGARIKTWQGGLGSVKNIS
FSNIQVSDVKVPIMIDQYYCDKRMCKNQTGAVAISNVKFNQIIGTYSAKPIHLACSNSIP
CTDVDLIDIQLKPSTNYRGINQLGLCWNSYGKSQAPLLPSSMDYCVRRGSGFVRGISRSH
EHVCL
NT seq 1638 nt   +upstreamnt  +downstreamnt
atggcagataatgttgccgctgaagaatctggatcagagaactatgctctatggagtaga
tcatttagtattcgtttggtaggtcgaaataagctaggatttgtagatgagaaattaggg
agctacctagagtgtctgttggctggaggaagagaggaagagaggaaacattatatcttt
caaatgaagaaaaattataggcacttttctttagtatttctctttgttcttctacttatt
tttgccactgcattttccataatatcagttgatgcaaggaaacaccataccaagaagagc
aaaatacatcacaaacataggaaacaacagagaaatggaggtggaaataaagcaccaaat
tgttcaaactctccttctcctgccccaactccaactccaactccgtctcatggattttac
ccaacacaatcacccatttttgatatcttgtcctttggagccaaaggtgatggagttact
gatgataccaaggcacttgaagcagcctgggaagcagcttgcaaagtccaaggggctact
ctagagattccttctgaatttcaattcttaatcaatcccataacacttcaaggaccatgc
atgcctaactttgtttttcaggtagatggaatagttttggctcctccaaaagtagggtcc
tggccaaaatccagtttgtttcagtggttgaattttaagtggatgcacaactttaccatc
caaggtactggcacccttgatggccaaggctataactggtggaaactttctcaaattgat
tatttccaggtgatgaagaaatctaaaagcattcctgatatgaaaccgactgttttacgg
ttttatggtagctataatgtgacagtacgtgatatcaaaattaaaaacagtcctcaatgt
caccttaaatttgacaattctaaaagaataaaagtcaacaacattacgatttctgctcca
gaaagtagcccaaacactgatggaattcacctccaaaacacacaagatgttgagatcaat
cactccaatatagggacaggagatgattgcatatcaattcaaactggttgctccaatatt
catgtccatcacatgaattgtggtcctggacatggcataagcttgggaggactaggaaaa
gataaaagtgttgcgtgcgtttcagacatcattgttgagaacgtgaacttgcaaagcact
atgtatggtgcaaggattaagacatggcagggtggtcttggatcagtcaagaacatatca
ttttcaaacattcaagtatcagacgttaaggtaccaatcatgatagatcaatattactgt
gacaaacgtatgtgtaagaatcaaacaggagcagtagcaatatccaacgttaaattcaat
caaattattggaacttattcagccaaaccaattcatctagcttgcagtaattcaattcca
tgtacagacgttgatttaattgacattcaattaaaaccatcgacgaattatcgaggaatt
aatcaactgggattgtgttggaattcttacggaaaatcacaagcaccacttcttccttca
agtatggattattgtgttagaagaggaagtggatttgttagaggcatttcaagatctcat
gaacatgtttgcttgtga

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