Solanum dulcamara (climbing nightshade): 129872322
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Entry
129872322 CDS
T09577
Name
(RefSeq) ABC transporter B family member 19
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129872322
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdul02000
]
129872322
04147 Exosome [BR:
sdul04147
]
129872322
04090 CD molecules [BR:
sdul04090
]
129872322
Enzymes [BR:
sdul01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
129872322
Transporters [BR:
sdul02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
129872322
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129872322
CD molecules [BR:
sdul04090
]
Proteins
129872322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
Zeta_toxin
AAA_29
AAA_22
AAA_21
nSTAND1
DUF87
AAA_15
AAA_30
Glyco_transf_22
Motif
Other DBs
NCBI-GeneID:
129872322
NCBI-ProteinID:
XP_055803248
LinkDB
All DBs
Position
11:60368772..60376618
Genome browser
AA seq
1249 aa
AA seq
DB search
MAETTEGKSMPEAEKKKEQSLPFYQLFSFADKYDYLLMICGSIGAILHGSSMPVFFLLFG
EMVNGFGKNQMDLHKMTHEVSKYALYFVYLGLIVCASSYAEIGCWMYTGERQVSALRKKY
LEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVS
AWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGE
TKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQSDGGK
AFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIVQDTLDGKCLSEVSG
NIEFKKVTFSYPSRPDVIIFRDFCIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNEGQ
VLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPDATMAEVEAATCASNAH
SFITLLPNGYSTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQ
EALDRLMVGRTTVVVAHRLSTIRNVDSIAVIQQGQVVETGTHEELIAKAGAYASLIRFQE
MVGNRDFSNPSTRRTRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMISNAETD
RKNPAPQNYFCRLLKLNAPEWPYSIMGAVGSVLSGFIGPTFAIVMSNMIEVFYYTNPATM
ERKTKEYVFIYIGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEE
NNSSLLAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILATFPLL
VLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQEKIISLFSQELRVPQ
MQSLRRSQMSGLLFGVSQLALYGSEALILWYGAHLVNNGVSTFSKVIKVFVVLVITANSV
AETVSLAPEIIRGGEAVGSVFSILDRSTRVDPDDLEGDPVESIRGDIEFRHVDFAYPSRP
DVSVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPTGGKVMIDGKDIRRLNLKS
LRLKIGLVQQEPALFAASIFENIAYGKEGATEAEVIEAARAANVHTFVSGLPEGYKTPVG
ERGVQLSGGQKQRIAIARAVLKDPSILLLDEATSALDAESECVLQEALERLMRGRTTVLV
AHRLSTIRNVDTIGVVQDGRIVEQGSHSELISRPEGAYSRLLQLQHHRI
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggcggagactactgaagggaaatcaatgccagaggcagagaagaaaaaagaacaaagt
cttcccttttatcagcttttctcttttgctgataagtatgattatcttcttatgatttgt
ggaagtattggagctattttacatggctcttctatgcctgttttctttctactttttggt
gaaatggttaatggtttcggaaaaaatcaaatggatttgcacaaaatgacccatgaagta
tcaaagtatgctctgtatttcgtgtaccttgggttgatagtttgtgcatcatcctatgca
gagattggttgttggatgtacactggtgaaaggcaagtgagtgcactaaggaagaaatat
ttagaggcagtattgaaacaggacgttgggttctttgatacagatgcaagaacaggggat
atcgttttcagtgtttcaacggatactctactggtccaagatgccatcagtgagaaggtg
ggtaatttcattcattacctttcaaccttcttggcggggttggtggttggtttcgtgtca
gcgtggaggttagctctcctcagtgtggcggttattcctggaattgcttttgctggaggt
ctttatgcttatactctcaccggtctcacctcaaaaagcagagaatcctatgccaatgct
ggtattattgctgagcaggcaattgcacaagtcagaacagtttactcatatgtgggcgag
accaaagcccttaattcatattctgatgcaattcagaacacattgaagctcggatacaag
gctggcatggctaaaggcttgggtttgggatgtacttacggaatagcatgcatgtcatgg
gcccttgtattttggtatgctggggttttcatcaggaatggacagagtgatggtggaaaa
gcatttactgctattttctcagccatcgttggtggcatgagtttgggtcagtcattttcc
aatcttggggccttcagcaaaggaaaagcagctgggtacaagttaatggagatcatcaag
cagaaacctaccattgttcaagatactctagacgggaaatgcctgtctgaggtcagcggg
aacattgaattcaaaaaggtgaccttcagctatccttcaaggcctgatgtgatcatcttt
agagatttctgcattttcttccctgctggaaagacagttgccgtggttggtggcagtggc
tcaggaaaaagcacagtcgtctcattgatagaaagattttatgatcctaatgagggtcaa
gttttgctggacaatgtggacataaagacgctacaacttagatggttgcgtgatcagatt
ggccttgtgaatcaagagcctgcattatttgctactaccatacttgagaacatattgtac
ggaaagcctgatgcaactatggctgaagttgaggcggctacctgtgcttccaatgcacat
agctttattaccttgcttcctaacggatacagcacccaggtgggcgagcgtggtgtccaa
ctctctggtggacagaaacagagaattgctattgcaagagctatgttaaagaacccaaag
atcctcctgcttgatgaggccaccagtgctcttgatgctggttccgagagcattgtccag
gaagctctggaccgtctcatggttggccgtaccactgtagttgtagctcaccgtctctcc
actattagaaatgtcgattcaatcgcagttatacagcaagggcaggtagttgagactgga
acacatgaagaactaattgccaaagccggggcttatgcttctttaatcagattccaggaa
atggttgggaacagagacttctcaaatccatctactcgtcgtacacgttcaactcggtta
agtcattcactatcaacaaagtctctaagtctccgctctggaagtttaaggaatttgagc
tattcatacagcaccggtgcagatgggcgtatagaaatgatttctaatgctgaaacagat
agaaaaaatcctgcaccacagaattatttctgccggcttctcaaactgaatgcgcctgag
tggccttattcaatcatgggagccgttgggtctgtcctctccggtttcattggtccaact
tttgctatcgtgatgagcaacatgattgaggtattctactatacaaatcccgcaaccatg
gaaagaaagacgaaggaatatgtcttcatctacattggagcgggtctttatgctgttgta
gcatatttaatacagcattacttcttcagtattatgggagaaaacctcactaccagggtt
cggaggatgatgttagcagcaattttaaggaatgaagttggatggttcgatgaggaggaa
aacaattcaagtctactagcagctcgcttagctacagacgctgcagatgttaaatctgcc
atagcggagaggatctccgttatactgcagaatatgacatctcttctcacttcattcata
gtcgcatttatagtcgaatggcgagtctcactgctcatcctcgccacatttccgcttctc
gtcttggccaatttcgctcagcaactctcactgaaaggatttgctggagacacagccaag
gcgcatgcgaagactagcatgattgctggagaaggagtaagcaatattagaactgtagca
gccttcaatgcccaagagaagattatctctttgttctcccaagagcttcgagttcctcaa
atgcagagtcttcgacgaagccaaatgtcaggacttttatttggtgtatcacagcttgca
ctttatggttctgaagctctgattctatggtatggtgcacaccttgttaacaatggggtc
tcgactttctctaaggtgattaaggtctttgtagtccttgtgatcacggctaattcagtt
gctgaaactgtcagcttagcacccgagattattaggggcggtgaagctgttggttctgta
ttttccattcttgatcgctctaccagggtagatcctgatgaccttgaaggcgatccggtc
gaatcaattagaggggatattgaattccgtcatgttgattttgcatacccttcacgaccg
gatgtctctgtgttcaaggacttcaatctaaggattcgcgctggccaaagccaagctctt
gtgggggcaagtggctctggaaagagttctgttatagccttaatagaaaggttctatgat
ccaacaggtggaaaagttatgattgatgggaaagacataaggagattaaacttgaagtct
ctaaggcttaaaattggtttagtgcaacaagagccagctctgtttgcagctagtattttt
gaaaatattgcctatggtaaagagggtgcaacagaagccgaagtcattgaagcagctcgc
gcagcaaatgtacacactttcgtaagtggtttgcctgaaggttacaagaccccagttggt
gagagaggtgttcaactctccggaggacaaaaacaaaggattgcaattgcaagggctgtt
cttaaagatccatcgattctcctactagatgaggctacaagtgcactcgatgctgagtcc
gaatgtgtgttacaagaagcacttgaaaggttgatgagaggtcgaaccaccgttctggtg
gctcaccgattatcaacaattcgtaatgtggatactattggagttgtgcaagacggtcga
attgttgaacaaggaagtcattctgagttaatcagcaggccggaaggtgcatattctaga
ctattgcaactacaacaccaccgcatatga
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integrated database retrieval system
