Solanum dulcamara (climbing nightshade): 129874353
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Entry
129874353 CDS
T09577
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdul03036
]
129874353
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
129874353
REST complex
129874353
Heterochromatin formation proteins
Other heterochromatin formation proteins
129874353
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
129874353
NCBI-ProteinID:
XP_055805597
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All DBs
Position
11:40975258..40988891
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AA seq
1363 aa
AA seq
DB search
MKRLRDDGYANPQFKRPFGSSRGEGELYGQSQLPGSGAGGGGSGGGGTGGGGAGASASTQ
KLTTNDALSYLKEIKDMFQDQREKYDLFLDVMKDFKAQRIDTAGVIARVKDLFKGHSNLI
LGFNTFLPKGYEITLTDEEQAPPKKTVEFEEAISFVNKIKKRFQNDDHVYKSFLDILNMY
RKEHKGITEVYQEVAALFEDHPDLLDEFTRFLPDTSGTASATQTLFGRSSFNRYDERSSA
IPSLRQSHMDKQRFRRDRIISPHAERDPSVEPPEMDDDKTMMKLHKEQKRRAEKENRDRR
GRDQDYREPENENNGDLSMHRIADKRKSARRVEEFGGTYDDKDGVKNMYSQEFTFCERVK
ERLCSPTDYQAFLKCLHIYSTEIITRKELQSLVADLLGKHPDLMEGFNEFLERCERIDGF
LAGVMSKKSLWNEGHTSKSVKEEEKDREQKREIDGGKEKDRYKEKYWGKSIQELDLSNCQ
SCTPSYRLLPEDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRC
EDDRFELDMLLESVSSTTKRAEELLNSLNDNSVGVDGPIRIEDHFTALNLRCIERIYGDH
GLDVMDILRKNPPLTLPVVLTRLKQKQEEWTKCRSDFNKVWAEIYSKNHYKSLDHRSFYF
KQQDSKNLSTKSFVAEIKEIKDQKLKEDGMILAIAAGSRHPISPHLDFEFSDPEVHEDLY
KLIKYSCEEVCSTEEQLNKVLRLWTTFLEAMFGVTYRLHGSEATDDDVLSKHRGLKSNGT
SIGESDGSPSMDANTTKSKQSKVICDGDAKCSPQRVNSSRTSFTNTDAHPKEDGLAVDGE
HLISSDAAASLGADNVCARMESTSGRDTRPHNGTAEDGQGVKSNIDNLPTSEGGISRSLP
LVNDGFAEGSRINGYKAESVDPSKNEKEEGELSPNADFEEENFVGYRDGASRNGSMQYQS
GGAEVIGCQDVAGDNEADADDENSENVSEAGEDVSGSESAADECSREEHEEEDDGEHDEL
DGKVESEGEAEGTSEANFIGGDGTVLQMSEQFLLTSKPLAKHVASPQCGGVKNGLQVFYG
NDDFYVLFRLHQILYERLLSAKINAASSESKWRTGKETGSDPYARFIHALYSLLDGSAEN
AKFEDDCRSIIGNQSYVLFTLDKLIYKLVKQLQTVSSDELDGKLLQLYEYERSRKPEKYV
DSVYYEDVHALLHEENIYRFDSTSSPTRLSIQLMDDGSEKSEAVAVYVDPNFAGYLHNDY
LSVEHGKKESSAVMLNRSVSRNKRKHANHDVSSALCMVMENIILVNGLECKMASNSSKIS
YVLDTEDFFYRLGRKRRSILAGRLSCHGQARIERFHRVLTSSL
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattaagggatgatggatatgctaatcctcaatttaagcggccatttggttct
tctcgtggagaaggagaattgtacggccaatcacagcttcctggaagtggtgctggtggt
ggaggcagtggcggtggcggcactggtggagggggtgctggtgccagtgctagtacccaa
aagttgacaactaatgatgcattgtcttatttgaaggaaattaaggacatgtttcaagat
caaagggagaaatatgacttgttccttgatgtcatgaaagactttaaggctcaaagaatt
gacactgcgggtgtcatagcaagagtaaaagacttgtttaaagggcattcaaatttgatc
cttggcttcaacactttcttaccaaagggctatgaaataaccctcactgatgaagaacag
gctcctccaaagaaaacagttgagtttgaagaagcaatcagctttgtgaacaaaataaag
aaacgtttccaaaatgatgatcatgtgtacaagtcttttctagacattttgaacatgtat
aggaaggaacacaagggcatcactgaggtgtaccaggaggttgcagcgctttttgaagac
cacccagatttgctggatgagttcacaagattcctgccagatacttcagggactgcatca
gcaacacaaacattgtttggccgctcttctttcaatcgttatgatgagaggagctctgct
attccatcgctgcggcaatcacacatggacaagcaacgtttccgtcgggataggattatc
agtcctcatgcagaacgtgatcctagtgttgagcctcctgagatggacgatgataaaaca
atgatgaagttgcataaagagcaaaagagacgtgctgaaaaagagaacagggaccgcaga
ggtcgcgatcaggattacagagaacctgagaatgagaataatggagatttaagcatgcac
cgcattgctgataaaaggaaatctgctcggagggttgaagagtttggaggcacttacgat
gataaagatggcgtgaaaaatatgtatagccaagagttcactttctgtgaaagagtaaag
gagagactatgcagtccaactgattaccaggcattcttgaagtgcctccatatttatagt
acagaaataattacaagaaaggaattacaaagtttggttgctgatttacttggaaaacat
ccagatcttatggagggtttcaatgaatttttggagcgctgtgaacgaatagatggattt
ctggcaggtgttatgagcaaaaagtctttatggaatgaagggcatacatcaaagtcggtg
aaggaggaggagaaagacagagaacagaagcgtgaaattgacggaggtaaggaaaaggac
cggtacaaggagaaatactggggaaaatccattcaggagcttgacctttcaaactgtcag
agttgcactcccagttatcgacttcttcctgaagattatccaatacctacagcgagccaa
aggtcagagctcggggctcaagtgttgaatgatcactgggtatctgtgacctcaggaagt
gaggactactcattcaagcacatgcgtagaaaccagtatgaagaaagtctgtttcgatgt
gaagatgataggtttgagctagacatgttattggagtcagtgagttcaaccactaagcgt
gcagaagagttattgaattctcttaatgataattcagttggtgtggatggccctatccgc
attgaagaccacttcacagcattgaatttaaggtgcattgaacggatctatggtgaccat
ggtctggatgtgatggacattttgcggaaaaacccgcctcttacgttgcctgttgtatta
acccgcttgaagcagaaacaggaggagtggacaaagtgtcgctcagacttcaacaaagtt
tgggctgaaatttattctaagaaccattacaaatcacttgatcaccgaagtttctatttc
aagcaacaagattcaaagaaccttagcacaaaatcctttgtggcggagatcaaagaaatc
aaggatcaaaagctgaaagaagatggcatgattcttgctattgctgctggtagtagacat
ccaataagtcctcatcttgattttgaattttctgatcctgaagtgcatgaagacttgtac
aaacttatcaagtattcttgcgaagaggtctgttccacagaagagcagttaaataaagta
ctaaggttatggaccacctttcttgaggcaatgtttggtgttacttatcgtcttcatggc
tctgaggctactgacgatgatgtcttgtcaaagcatcgtggtttgaagagcaatggaact
agcattggtgaaagtgatggaagtcctagtatggatgctaacaccactaagtccaagcaa
tcaaaagttatctgcgatggagatgctaagtgttcccctcaacgagtaaattcttccagg
acaagcttcacaaatacagatgctcaccccaaggaagatggattagcggtagatggtgaa
cacttaattagttctgatgcagctgcttccctcggagcagataatgtttgtgcaagaatg
gaaagtacttcaggccgtgatacacgaccccataatggtactgctgaggatggccaagga
gtcaagtctaatattgataacttaccaacttcagagggtggcatttctagatcacttccc
ttggtaaatgacgggtttgctgaaggttctagaattaatgggtataaggctgaatcagtt
gatccctccaaaaatgagaaagaagaaggtgagttgtcgcctaatgcggactttgaagag
gaaaattttgttggctatcgagatggtgcctcccgcaatggaagtatgcaatatcaatct
gggggtgctgaagttattggttgtcaggatgttgctggtgataacgaggcagatgctgat
gatgaaaatagtgaaaatgtttctgaggcaggagaagatgtttcaggtagtgagtctgct
gctgatgagtgttccagggaggagcacgaggaagaagatgatggagagcatgatgagctt
gatggtaaagttgagagtgaaggtgaggcggagggcacgagtgaagcaaactttattgga
ggtgatggcactgtgcttcaaatgtctgaacaatttttgcttacttcgaagcctctcgct
aaacacgtggcttcacctcaatgtgggggtgtaaagaatggcttgcaggtcttttatgga
aatgacgatttctacgtgctttttaggcttcatcagattttgtatgaaaggttattatca
gcaaagataaatgcagcatcatctgaatcaaagtggagaactggaaaggaaactggttct
gatccctatgccagattcatacatgctctgtatagtttgctagatggatctgcagagaat
gccaagtttgaggatgattgcagatcaatcattgggaaccagtcatatgtgctatttact
ttggacaaattgatatataaactggtcaagcagcttcaaactgtttcaagtgacgaactg
gacggcaagctgcttcagctatatgaatatgaaagatcacggaaacctgagaagtatgtt
gattcagtttattacgaagatgtgcatgccctcctccatgaggagaacatttaccggttt
gattctacgtcttccccgactcgcctgtccatccagttaatggatgatggaagtgagaag
tctgaagctgttgcagtttatgtagaccccaattttgctggttatctgcataatgactat
ctttctgttgaacatggaaagaaagagtcgtccgcggttatgctgaatagatctgtcagc
agaaacaagagaaagcatgccaaccatgacgtatcttctgccctgtgcatggtgatggaa
aatattatactcgtaaatggtttggagtgtaagatggcttcgaattcatcaaagatttct
tatgtattggacacggaggacttcttttaccgtcttggaaggaagagaagaagcattttg
gctggcagattatcatgtcatggccaagcgagaatagaacgctttcaccgtgttttgacg
tcttcattatga
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