Solanum dulcamara (climbing nightshade): 129876599
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Entry
129876599 CDS
T09577
Name
(RefSeq) DNA glycosylase/AP lyase ROS1-like
Organism
sdul
Solanum dulcamara (climbing nightshade)
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Gene cluster
GFIT
Motif
Pfam:
RRM_DME
Perm-CXXC
HhH-GPD
EndIII_4Fe-2S
Motif
Other DBs
NCBI-GeneID:
129876599
NCBI-ProteinID:
XP_055808051
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Position
12:complement(5027125..5037757)
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AA seq
1822 aa
AA seq
DB search
MDIGQGSSWIPATPGKPGFAKSAPICSNEQENQQAQVDWSDLQRKQALEHATSSTTEAQN
AAAYRGSVTVDRCFISSEAAVGTKSKMYGGGINMYNNFPSDNVDMWSNVSFGDLLAMAHA
GGSGTTPADETAYSVKCSFQPLINTQNADESSILSSFPFNLNSPSRMTGATLSSNIPFQF
KPVTPDMIKIKGQASNASNLDINVTTAARVIQSNEDIIKRAEANELQQNKEQPEQILDQS
ELQEYHKFDKEGKQDTELNTTPEQKPRRRKHRPKVVVEGKPKRTPKPRTKKQPGSEETKT
EKRKYVRRNKIGGPAATFAEEVNNTICHEGKPPSSEKTPTAKRKYVRRNQVNKSTEKSSE
EGSSGAIGRPAATSAEEVNNTIFHEGKPPGSKETLTTKRNVRRNQVNKSMEKISEEGSSG
TIDPTEVPRSRKSCRKSLSYEFESQARDENSSYRPSTLDLHANNSRSTAQSVQLGQEKEA
TSKETEVGITYNITRSLSQEVRNNLSQPEMQYPGHPTPDKVGWNHDKAMVGNHNESTRGN
SRIICSDLTHDKQASLLQMTPQSLNFSNCSSSACLPHGKGLKRQHSCRTDEAQFYSINAK
GAYFNSMQAYQAILPANKPDVYSNVGMHLPAIYKKMRAEKGHSSTSSYIKHFTGKTNYMP
SSQCNISGSPSNNSATNIGNNGMWNSNVMQAFVEAERLRRRRSTSATQVHDFASLHEIYK
QFPTSTSKEATKYGFGERYKTSHLSNACMGAPIADTRAAMKTKRKSKASILVSSAASDMY
THQHAKNARGSLPALTWRGMSPIDEIAEHLQHLDLNRESSQKQGQRGIITYHTKFQRESA
LVLYQRDGSIVPFGSSLVRKRKPRPKVDVDDETDRVWKLLLQDINSEGIDGTDEDKAKWW
EEERRVFNSRADSFIARMRLVQGDRRFSPWKGSVVDSVVGVYLTQNVSDHLSSSAFMSLA
AHFPLKTDSTQKHEGNTDIIIEEPEECATDHNVSIRWYEDQPNQPTHCQDSSGVYNTDSN
EEKAAVNDSESSENSTQCIKSAECSVILQSYSSREGSDLYGSTVVGFRDRKELNDLPSSP
SSVVSSENSAVIQASEGTESSNFCSSTSFLKLLQMAGTSGARGTRCTEHLQEGENLPFLG
KELSAPEKSGLSAESAHSALYATNLQNKLDMETVNDAEVNIELQFQTEDSNCNVQQVPEA
PTFSKTAVDVTERASIVFDSCKSEQRGLGSNLKNDTNHVRSKVDKVNDNPSKAKNGRLGK
EKENIDWDSLRLQAQANGKKRERTTNTMDSLDYEAVRCANVNEIAHTIRERGMNNKLAER
IKAFLNRIVSDHGSVDLEWLRDVPPDKAKEYLLSIRGLGLKSVECVRLLTLHHLAFPVDV
NVGRIAVRLGWVPLQPLPESLQLHLLELYPILESIQQYLWPRLCKLDQRTLYELHYHMIT
FGKVFCTKSKPNCNACPLRGECRHFASAFASARLALPAPEEKSIVSATEHKAADNNPREN
FTHLPLPLPPGKQQPVEHQKLINSAPIIEVPATPEPIVEVPSTPEQEQIQAPEIDIEDTY
LEDPNEIPMIELNMAEFTQNVKKYVENNMELHQVEMSNALVALTSEAASIPTPKLKNVSR
LRTEHQVYELPDSHPLLEGLDKREPDDPSSYLLAIWTPGETANSMQPPETQCNSQETGKL
CEDETCSSCNSIREAHSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLNPIN
VPRDWLWNLPRRTVYFGTSIPTIFKGLNTESIQHCFWRGFVCVRGFDHKTRAPRPLLARF
HFPASKLNRTNGKTNEDKGVAS
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggatataggccaaggcagttcatggatcccagcaactccggggaagccgggttttgca
aaatcagcaccaatttgcagtaacgagcaggaaaaccagcaagctcaagttgattggtca
gatttgcaaagaaaacaagcactggaacatgctactagcagcacaaccgaagctcaaaat
gctgctgcatatcgcggttcagtaacagtagatcggtgcttcattagctcggaagcagca
gtggggacaaagtccaaaatgtatggaggtggtataaatatgtacaataacttccctagt
gataatgtagacatgtggagtaatgtgtcttttggggatctgttggcgatggcacatgct
ggtggcagtggcaccacgccagcagatgaaacagcttatagtgtgaagtgttctttccaa
ccactcatcaatactcagaatgcagatgaaagctctattttatccagcttccctttcaac
ttgaattcaccatcaagaatgacgggtgcaaccttgagcagcaacatcccgttccagttc
aaaccggtaacaccagatatgatcaagattaaagggcaagcatctaatgcatcaaaccta
gatattaatgtgacaacagcagcaagagttatacagtcaaatgaggatataataaagaga
gctgaagcaaatgaactccaacagaataaagagcagccagagcagatcttggatcaatca
gaattgcaggaatatcacaagtttgacaaggaaggcaaacaggatactgaactgaatact
acaccagagcaaaaaccaagaagaagaaagcacaggcccaaagtggttgtagaaggcaag
cctaaaaggactcccaaaccaagaaccaaaaagcagcctggttcagaggagacaaaaaca
gaaaagaggaagtatgtccgaagaaacaagattggcggacctgcagccactttcgcagag
gaggtaaacaatacaatttgtcacgagggaaagccccctagttccgagaaaaccccaaca
gcaaaaaggaagtatgtcagaagaaatcaagtgaacaagagcacagaaaaatcttctgaa
gagggaagcagtggagcaattggcagacctgcagccacttccgcagaagaggtaaacaat
acaatttttcatgagggaaagcctcctggttccaaagaaactctaacaacaaaaaggaat
gtcagaaggaatcaagttaacaagagcatggaaaaaatctccgaagagggaagcagtgga
acaatcgacccgacagaagttcctcgttctagaaaatcctgcaggaaatcgttgagttat
gaatttgaaagccaagcaagagatgagaattcatcatacaggccctcaactttggatttg
catgcaaataattccaggtcaactgcacagtctgtgcagcttggacaagagaaagaagcc
acaagcaaagagacagaagtgggaataacttataacatcacccgctccctgagccaagag
gtgagaaataacttatcacaacctgaaatgcagtaccctggtcatccaactccggacaag
gttggctggaatcatgacaaagccatggttgggaatcacaatgaaagcacaagaggaaat
agcagaatcatttgttcagatttaactcatgataaacaggcaagcttactacaaatgaca
ccacagagcctgaatttttccaactgcagcagcagtgcatgcttgccacatggaaaaggc
ttgaaaagacagcattcatgtagaactgatgaagcacaattctacagcataaatgccaaa
ggggcatatttcaattctatgcaggcctatcaagcaatccttccagcaaataaacctgat
gtttatagtaatgtagggatgcatcttcctgctatttacaagaaaatgagagcagaaaaa
ggccacagctcaacatcttcctacattaagcattttactggcaaaactaactacatgcct
tcatctcaatgcaatatcagtggttcccctagcaacaattctgcaaccaatataggcaat
aacggaatgtggaattccaatgtgatgcaagcatttgtggaagcagagaggttaaggagg
aggagatcaaccagtgcaactcaagtacatgattttgcatctctgcatgaaatttacaaa
caatttccaacttctacatccaaagaagcaacaaaatatggatttggagaaagatataaa
acttcacatctatccaatgcatgcatgggagctccaattgcagacacccgagcagcaatg
aagacaaaaaggaagtcaaaggcaagcatccttgtcagctcggcagcttccgacatgtat
acccatcaacatgcaaaaaatgcaaggggttctctgccagctttaacgtggagaggcatg
tctccaatcgatgaaattgcagaacacttgcagcatcttgatttaaatagagaaagcagc
caaaaacaaggtcaacgtggaatcatcacctaccacaccaagtttcaaagggagagtgcc
cttgttctttatcaaagagatggaagtattgtcccttttggaagttcgttagttagaaaa
agaaaaccgcgtccaaaagttgatgttgacgatgagactgatagggtatggaagcttttg
ctgcaagatataaacagtgaaggcattgatggaacagatgaagacaaggcaaaatggtgg
gaggaagaacgtcgagtctttaatagtagagcagactcatttattgcacgcatgcggctt
gtccaaggagaccggcgcttctcaccttggaagggatccgttgtggactctgtggttggg
gtatatcttacacagaatgtttcagatcacctttctagttctgcattcatgtcactcgct
gcccactttcctctgaagacagacagtactcagaagcatgaaggaaacacagatattatt
attgaagaacccgaagagtgtgcaacagaccacaatgtttctatcagatggtatgaagat
caaccaaatcagccaacccattgtcaggattcttcaggagtctataatacagattcaaat
gaagaaaaagcagctgtcaatgactctgaatcaagtgaaaatagcacacaatgcataaag
tcggcagaatgttctgtaattctgcaatcatattcttctagagaaggctcagatctgtat
ggatcaacagttgtgggtttccgagatcgaaaagaattgaatgatttgccttcttctccg
agttctgtagtttcttctgagaactctgcagttattcaagcttcagaaggaactgagtca
agcaacttttgcagctccacttcttttttgaagctattacagatggcaggaacttcagga
gcacgaggaaccaggtgcactgaacatttacaagaaggtgaaaaccttccattccttggc
aaggaacttagtgccccggaaaaaagtggattgtcagcagaatctgcacattcagcactg
tatgctacgaaccttcaaaataagttggacatggagacagtgaatgatgcagaagtcaat
attgaacttcagtttcaaactgaagatagcaattgcaatgtccagcaagttccagaagcc
ccaaccttttcaaaaaccgctgtagatgtcacagaaagggccagcatagtttttgattca
tgcaagtctgagcaaagaggtttggggtcaaacttgaaaaatgacactaatcatgttcgt
agcaaagtagacaaagtaaatgacaatccttctaaagctaaaaacggaaggcttgggaag
gagaaagagaacattgattgggacagcttacggttacaggcccaggcaaatggcaagaaa
agagaaaggacaacaaacacaatggattcactggactatgaagcagtgaggtgtgcaaat
gtcaatgagatagcccatacaattagagaacgaggaatgaacaacaagctggcagagaga
atcaaggcttttcttaaccggattgttagtgatcatggaagcgttgaccttgaatggctg
agagatgttccaccagacaaagcaaaagagtatttactgagcataaggggcttgggtcta
aagagcgtggaatgtgtgagacttttaacacttcaccaccttgctttccctgttgatgta
aatgtagggcgtatagctgttagactagggtgggtacccctgcagccgttgcccgagtca
ctacagttgcatcttctggaactgtacccaatactggagtcaattcaacagtacctatgg
ccgcgtctctgcaagcttgatcaaagaacactatatgagctacattatcatatgatcacc
tttgggaaggtcttctgtacaaaaagcaaacccaattgcaatgcatgtccactgagagga
gaatgcagacactttgcaagtgcatttgcaagtgcaaggcttgcccttcccgcaccggaa
gagaaaagcattgtcagtgcaacagaacacaaagccgctgacaacaatccaagggaaaat
ttcactcacctgcctctgcctttacctccgggtaagcagcaaccagtggagcatcagaaa
ttgatcaactcagctcctattattgaagtgccagcaacaccagaacccattgttgaagtt
ccttccacacctgagcaagagcaaatacaagcaccagaaatcgacatagaggacacttac
cttgaagatcctaatgaaattcctatgattgaattgaatatggcagagtttactcaaaat
gtaaagaaatatgtggaaaacaatatggagcttcatcaggtagaaatgtcgaatgcctta
gtagccttgacttcagaagctgcatcaattcccacacctaaacttaagaatgttagccgg
ctcagaactgaacatcaagtctatgaacttccagattctcatcctcttttggaagggttg
gacaaaagagaacctgacgatccttcttcctatcttcttgctatttggacaccgggtgaa
acagcaaattcaatgcaacctccagaaactcagtgcaactctcaagaaactggcaaacta
tgtgaagatgagacttgttcctcatgcaacagcatacgtgaagcacattctcaaacagta
agagggactcttctgataccatgtcgaacagctatgagaggaagctttccactcaatggt
acatactttcaggtcaatgaggtgttcgcggaccatgactcaagccttaacccaatcaat
gtcccaagggattggctgtggaatctcccacggcggactgtctactttggaacctcaata
cccacgatattcaaaggcctaaacacagaaagtatccaacactgcttttggagagggttt
gtttgtgtgcgaggatttgatcataagacacgagcacctcgaccgctattggcaaggttt
cattttccagccagcaagttaaataggactaatgggaaaacaaatgaagacaaaggggta
gcctcctga
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integrated database retrieval system
