Solanum dulcamara (climbing nightshade): 129877416
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Entry
129877416 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129877416
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129877416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129877416
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
129877416
DNA repair and recombination proteins [BR:
sdul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129877416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
129877416
NCBI-ProteinID:
XP_055808888
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All DBs
Position
12:complement(62551912..62556423)
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AA seq
385 aa
AA seq
DB search
MCSYKFKKQGGVVVVDISPQSLSHINGRPVLQPYNNSHKKNTSNFKISPPPISPKIKSPR
QQSIKKVNDSNVLNISNEKIVTPKIPKVKNSTLTTPPISPKIKSPRQPSIKKMKNDSKNT
ILIKNSCKKDSSFMILEVAGSIAAARKEQVANMQVQRKQRIAHYGRTNSAKFNDAKLVTA
AAVDSCSKEGKRCSFITPNSDPVYITYHDEEWGVPVHDDDLLFELLVLTVAQVGSDWTSV
LKKRHDFRDAFSGFDPEIVAKYNEKKINSTSIEYGIELSQVRGVVDNSNRILEIKKQFGS
FHKYLWGFVSNKPITTQYKAFNKIPVKTSKSETMSKDMVKKGFRYVGPTIIHSFMQAVGL
TNDHIITCPRHAQCAILATQEPIAM
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcttacaagttcaagaaacaaggaggagttgttgttgttgatatttctccacaa
tcactctctcatatcaatggacgtcctgttcttcaaccatacaacaattcccacaaaaaa
aatacatcaaatttcaagatttcacctcctcctatctctcccaaaatcaagtcccctaga
caacaatctatcaagaaagtgaatgattctaatgtcttgaatataagtaatgagaaaatt
gtgacacccaaaatcccaaaagtgaaaaattcaacactaacaactcctcctatttcacct
aaaatcaagtcacctagacaaccatctatcaagaaaatgaaaaatgattctaaaaacaca
atcttgataaaaaattcttgtaaaaaagactcttcttttatgattcttgaagttgctgga
agcatagcagcagcaagaaaggaacaagttgccaatatgcaagtgcagaggaaacagaga
attgcacattatggaagaactaattctgctaagttcaatgatgccaaattagtcactgct
gctgctgttgattcatgttctaaagaagggaaaagatgcagctttatcacacctaattct
gaccctgtctacattacataccatgatgaagaatggggagttcctgtccatgatgatgat
ctgctatttgagttgttggtattaactgtggctcaagttggatcagactggacttcagtg
ttaaagaaaaggcacgatttcagggatgcattttcaggatttgatccagaaattgttgca
aaatacaatgaaaaaaagataaattcaacaagtattgaatatggaattgagttgagccaa
gtcagaggggttgttgacaactctaatagaattttagagatcaagaaacaatttgggtca
ttccacaagtacctatggggatttgtgagcaacaagcccattacaacacaatacaaggcc
ttcaacaaaatcccagtaaagacatcaaaatcagaaacaatgagcaaagatatggtgaaa
aaaggctttagatatgttggcccaactattatacactctttcatgcaggcagttgggctt
accaatgaccatattatcacttgtccaagacatgcccaatgtgctattctagcaactcaa
gaaccaattgctatgtga
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