KEGG   Solanum dulcamara (climbing nightshade): 129880333
Entry
129880333         CDS       T09577                                 
Name
(RefSeq) uncharacterized protein LOC129880333
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    129880333
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129880333
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     129880333
SSDB
Motif
Pfam: HD HD_assoc_2 LRR_8
Other DBs
NCBI-GeneID: 129880333
NCBI-ProteinID: XP_055810298
LinkDB
Position
2:complement(11530046..11542318)
AA seq 473 aa
MGDCNNGDLLPSYNYGAAPFDDRRFSKHIHDNVHGNIYLDRQSLKFIDTEQFQRLRDLKQ
LGLTYMVYPGAVHSRFEHSLGVYWLASDAVHRLKTYQGLELGIESFDVQTVKLAGLLHDV
GHGPFSHMFEREFLPRICDGIKWSHEDMSLKMIDYIVDEHSIDIDSDTLKKAKEMIVASE
KGKSVSSKEKQFLYDIVANGRNGIDVDKFDYIERDTRACGLGCNFQFQRLMETMRVIDNE
ICYRAKEYLTIHKLFSTRADLHRTVYTHPKVKAIELMVVDALIKANDHLQIASHIDEPAQ
YWMLDDTIVKTIETSTHQELEESRNLIRRIRRRDIYQFCNEFAVPKENLEHFKNVTAQDI
ICSQNSDAHLSEEDVIVTNVKIDLTSGKNNPLERISFFQDYDSFEKSHIKDDRISHLLPA
CYQDMIVRVYTREPKLVEAVSNAFENFQMKTYGKKTQVHATPEKKRRLKYKEK
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgggagattgtaacaacggtgacctattaccgagctacaactacggcgcggctccgttc
gacgaccggcggttctccaagcatattcatgataatgttcacggcaacatctatctcgat
cgccaatcactgaagttcattgacactgaacaatttcagaggcttcgcgatttgaagcag
ctaggtcttacatacatggtttatcctggggctgtgcactctcggtttgagcattcccta
ggggtctattggctggccagtgatgctgtacatagacttaagacctatcaaggactggag
cttggcattgaatcttttgatgtacagactgtgaaacttgctggattactacatgatgtg
ggtcatgggccattcagtcacatgtttgagcgtgaatttcttcctcggatttgtgacggc
attaaatggtcccatgaagatatgtctttgaagatgatagactacattgttgatgagcat
agcattgatattgattctgacactctgaagaaagcaaaggaaatgatagttgcttctgag
aaaggtaaatcagtgagctcgaaagagaagcagttcttgtatgatattgttgctaatggg
agaaacggaatagatgttgacaaatttgattacatagagcgtgacaccagggcttgtggc
cttgggtgcaattttcagttccagaggctaatggaaacaatgcgtgttatagacaatgaa
atatgttatcgggcaaaagaatatcttacaatccacaagctattttccactcgtgctgat
ttgcatcgtacagtctatacgcatccaaaagtgaaggcaatagagctcatggttgtagat
gccttgataaaagccaatgaccatcttcaaattgcttcacacatcgatgaaccagctcag
tactggatgttagatgatacaatagtcaaaacaattgaaacttctacccatcaagagcta
gaggaatccagaaatctgattcgtcgaattcggaggagggacatataccagttctgtaat
gagtttgctgtgcccaaggagaatctggagcattttaaaaatgttacggctcaagacata
atttgttcccagaattctgatgctcatttgagtgaggaagatgtcattgttactaatgtc
aaaattgatttgactagtggaaagaataatccattggaaaggatcagcttcttccaggat
tatgatagctttgaaaaatcccatataaaggatgatcgcatcagtcacttgttgcctgcg
tgttaccaggatatgattgttagagtttataccagagaacctaaactggtagaagctgtt
tccaatgcatttgagaattttcagatgaagacttatgggaagaaaacgcaagtgcatgcg
actcctgaaaaaaagagacgcctgaagtacaaggagaaataa

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