Solanum dulcamara (climbing nightshade): 129882806
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Entry
129882806 CDS
T09577
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00280
Valine, leucine and isoleucine degradation
sdul01100
Metabolic pathways
Module
sdul_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
129882806
Enzymes [BR:
sdul01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
129882806
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
MCCA_BT
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
HlyD_D23
ATPgrasp_ST
ATP-grasp_4
ATPgrasp_TupA
RnfC_N
APO_RNA-bind
Motif
Other DBs
NCBI-GeneID:
129882806
NCBI-ProteinID:
XP_055813235
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Position
3:complement(71310708..71329448)
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AA seq
737 aa
AA seq
DB search
MSLMAFILRRKVHTKSYIIQQSSLYSTTPAIKSSNNQRIEKILIANRGEIACRIIRTAKR
LGIRTVAVYSDADRDSLHVKSADEAFRIGPPPARLSYLNSSSIIEVANKSGSQAIHPGYG
FLSESADFAQLCEDENLLFIGPPASAIRDMGDKSASKRIMGAAGVPLVPGYHGDEQDIDF
MKLQADKIGYPILIKPTHGGGGKGMRIVQSPNEFADSFLGAQREAAASFGISTILLEKYI
TKPRHIEVQIFGDKQGNIIHLYERDCSVQRRHQKIIEEAPAPNVSSDFRSHLGQAAVSAA
KAVNYHSAGTVEFIVDTQSGQFHFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLP
LTQSEVPFSGHAFEARIYAENVPKGFLPATGVLHRYCPVTVTSAVRVETGVEEGDTVSMH
YDPMIAKLVVWGQDRLSALIKMKDCLSKFQVAGLPTNIDFLIKLASHRAFQNGEVETHFI
ERYKDDLFIDGSNSISVEKAVSAAKHAASIVASCICQNELAAFKDKAPGGLHLWYGNPPF
RVNHFAKRTVDLEWENQYSISGSNLLTVSITYLPDGKYLVETGESSSPGLEIQVTQLSNN
DYRVEVDGLSLNVCLAAYSKDQIEHIHIWHGDYQHHFKHRMGLEIYDDDETIDKPARVAT
SYPSGTVIAPMAGLVVKVLVKDAEKVQEGQPVLVLEAMKMEHVVKAPANGYVKGLEVKVG
QSVQDGIKLFSLKESRL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgatggcgttcatactccggcgaaaagtacacacgaaatcctacattattcaa
caatcatcgctttactccacgacgccagcgataaagagttcgaataatcaacgaattgag
aaaatactaattgcaaatagaggcgaaattgcttgtagaattatcagaactgctaagaga
ttagggattcgtactgttgcagtttacagtgatgccgatagagatagtttacatgtgaag
tccgccgatgaggcttttcgaattggtcctcctcctgctcgtttgagctatttgaattct
tcttctattattgaagttgctaataaatcaggctctcaggctatccacccaggttatgga
ttcttatctgaaagtgctgattttgctcaactttgtgaggatgagaatctcttatttatt
ggacctcctgcctctgcaatccgtgacatgggtgataaaagtgcttcaaagagaataatg
ggtgcagctggggttccacttgtgcctggatatcatggtgatgagcaagatattgacttt
atgaagttgcaagcagacaaaattgggtatcctattttaattaagccaacccatggaggt
ggagggaagggtatgaggattgttcaaagtccaaatgaatttgcggactcattcttgggg
gcccaacgtgaggcagctgcatcatttggtataagtacaatcctactggagaaatatatt
actaaaccaagacacatagaagtccagatatttggggataaacaaggtaatataatacat
ctctatgagagagattgtagtgtgcagcgaagacaccagaagataatagaagaagctcca
gctcctaacgtgagctctgacttccgctcccatctgggtcaagcagctgtatctgcagct
aaggcagtcaattaccacagtgcaggaactgttgagtttatagttgatacacaatctgga
caatttcattttatggagatgaacacccgtcttcaggttgagcatcctgttacagagatg
attgttggtcaagatcttgtagagtggcaaatacgtgttgcaaatggggagcctcttccc
ttgactcagtcggaggtgccattttcaggtcatgcttttgaagcccgaatttatgctgaa
aatgttccaaaaggatttcttccagcaactggtgttcttcatcgttattgtcctgttaca
gttacatcagcagttagagttgagactggagttgaggaaggggacacagtaagcatgcat
tatgatcccatgattgcaaagctagtagtatggggacaggaccgcctttcagcactgata
aagatgaaggattgcttgtcaaagtttcaggttgcaggtttacccaccaatatagacttt
ctcattaagcttgccagtcatagggcttttcaaaatggtgaagtagaaactcattttatt
gagcggtacaaggatgatctgttcatagacggttccaattcaatatcagtggaaaaagct
gttagtgctgccaaacatgctgcatccattgtagcttcatgcatttgccaaaatgaactt
gcagcctttaaggataaggctcctggaggcctccatttgtggtatggtaatcctccattc
agagtcaatcattttgctaagcgaacagtggatcttgaatgggagaatcaatacagtatt
agcggttcaaatcttttaacagtctccatcacctatttgccagatgggaaatacctagtt
gagacaggagaaagcagttcccctggtttggagatccaagtgacacaattaagcaacaat
gactatagagttgaagtggatggcctaagcctaaatgtctgcttggcagcttactccaag
gatcaaattgagcatattcacatctggcatggcgactatcaacatcactttaaacatagg
atgggccttgaaatttatgatgatgacgaaacgatagacaaacctgctagggtggcgaca
tcttatccttctggcaccgtgattgcaccaatggctggtctagtggttaaagtattggtg
aaggatgcggagaaagttcaggagggacaacctgtgttagtattagaagcaatgaagatg
gagcatgtcgtgaaagcaccagctaatggttatgtaaaagggcttgaagttaaagtgggc
caatcggtccaagatggtatcaaactcttttctctcaaggagtcgaggctatga
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