Solanum dulcamara (climbing nightshade): 129886402
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Entry
129886402 CDS
T09577
Name
(RefSeq) sphingoid long-chain bases kinase 1
Organism
sdul
Solanum dulcamara (climbing nightshade)
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Gene cluster
GFIT
Motif
Pfam:
DAGK_cat
YegS_C
CERK_C
Motif
Other DBs
NCBI-GeneID:
129886402
NCBI-ProteinID:
XP_055817047
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Position
4:13554461..13569273
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AA seq
748 aa
AA seq
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MQKSGNLVKNNSLKVTTQQSLRRLGLCSQITAGQHSSPVVFPEKRSKGRSLTRGEFSLSN
NDPKKEKNEEHRIDIGDEQSDLLGYEVFSGKLVLDKGKAHKNPELEASKEVTSQDAVEAK
LTSKAMVWGSSMLHLEDVISVSHCPGLRHFTIHSYPLRRGSGALSCFLKTRRSQKDFRFL
ASSSEEALQWVNAFADQQCYVNLLPHPLAPSKKQASDLVTNEFPPESYVRCKNPPKMLVI
LNPRSGRGRSSKVFHRKVEPIFKLAGFKLEVVKTTSAGHARKLASTVDFSTCPDGIICVG
GDGIVNEVLNGLLTRDNQKEAISVPIGIIPAGSDNSLVWTVLGVRDPVSAAIAIVKGGLT
PTDVFAVEWVQSGRIHFGSTVTYFGFVSDVLELSEKYQKRFGPLRYFVAGFLKFMCLPKY
NFEVEYLPALKEATGEGKSSVIDMSELYTDIMRRSSKEGLPRASSLSSIDSIMTPSRMSG
ADLDTTCSSTEPSEYVRAIDAKSKRLSAGRSGNTTSEPEVIHPQLPHSVTPNWPRTRSKS
KTDKGWTGLTAANDPTRSSWANTTTNDKEDISSTMSDPGPIWDTEPRWDTEPHWNIENPI
ELPGPADDTEDVVRKDIVQKAAEEWVSTKGQFLGVLVCNHSCKTVQSLSSQVVAPKAEPD
DNTLDLLLVHGSGRLKLIRFFLLLQMGRHLSLPYVEYVKVKAVKVKPGKHSNSSCGIDGE
LFPVNEQVISSLLPEQCRLIGRAPGNCK
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagagtgggaatcttgttaaaaataattctttgaaagttacaactcagcagtcc
cttcgacgtctcggtttgtgttcccagattacagctgggcagcattcatctccggttgtt
ttccctgaaaaacggagcaaaggaaggagtctgacacgtggagaatttagtctaagtaat
aatgatcctaagaaagagaaaaatgaggagcatagaattgacattggggatgagcagtct
gacctgctcggatatgaagtattttctggaaagctggttttggacaagggaaaggcacat
aaaaatccggagttagaagcctcaaaggaggttactagccaggatgctgttgaagccaaa
cttacgagcaaggctatggtttggggttctagtatgctgcatctagaagatgttatttcg
gtatcgcactgtcctggactccggcattttaccatccattcatatcctctgagaagaggt
tctggtgctctttcttgttttctaaaaactcgaagaagtcagaaggactttcgcttttta
gcttcttcatccgaggaagcacttcaatgggtaaatgcatttgcagatcaacagtgttat
gtgaatttattgccccatcctctggctccatcaaagaagcaggcttctgatttggttact
aatgaatttcctcctgagtcatatgtacgatgtaaaaatcctcctaaaatgcttgtcatt
ttaaacccaaggtctggccgtggtcgttcaagtaaagtattccatcgcaaggttgaacct
atattcaagcttgctgggtttaagttggaagtagtcaaaaccacatctgcaggtcatgcc
aggaaacttgcaagcacggtagacttcagcacatgtcctgatggtattatatgtgtagga
ggtgatggaatagtgaatgaggttttaaacgggttactcactagggataaccagaaagaa
gcaatttcggttccaattggaatcattcctgctggttctgataattctttggtctggacc
gtgcttggagttagagatccagtgtcagctgccatagcaattgtcaagggagggcttaca
cctaccgatgtttttgctgttgaatgggttcaaagtggtagaattcactttggatcgact
gtcacctactttggctttgtaagcgatgtgctagaactatccgagaaataccagaagcgg
tttggtccattacgctactttgtcgctgggttcctcaaattcatgtgcttaccaaagtac
aattttgaagtggagtatcttccagcactaaaagaagcaactggagaaggaaaatcttcg
gtcattgatatgtctgaattgtatacagacattatgagaaggtcaagcaaggaagggctt
cccagagcctctagcttatcaagtattgattcaataatgaccccaagtagaatgtctgga
gcggacttggatactacatgtagtagcactgagccatcagaatatgtgcgcgccattgat
gcaaaatctaagcgcttgtctgctggacggagtggcaacacaacttctgaaccggaagtt
atccatcctcagcttccacattcagtaaccccgaattggcctaggactaggtccaagtca
aaaacagataaagggtggactgggttgactgctgcaaatgaccccactagatcttcttgg
gcaaatacaactacaaatgataaagaggatatctcatcaacaatgtcagaccccggccca
atttgggataccgaaccaagatgggacacagaacctcattggaatatagaaaatcctatt
gaattgcctggaccagcagacgatactgaagatgttgttcggaaggatattgtccagaag
gctgctgaagaatgggtgtctaccaaaggtcaatttcttggtgtcctggtatgcaatcat
tcatgcaaaactgttcaaagcttaagttcacaggtcgtggccccaaaagcagaacctgat
gacaacacgttagatctgttgttggtccatggaagtggaagactgaagcttataaggttc
tttttgcttctgcaaatgggccgacacctttccctcccatatgttgagtatgtcaaggtt
aaagcagtaaaggttaagcctgggaagcactctaatagtagctgtggtattgatggtgaa
cttttcccagtaaacgagcaagtgatttcgtccttgcttccagaacagtgcaggcttatt
ggtcgcgccccaggtaattgcaagtga
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