Solanum dulcamara (climbing nightshade): 129886884
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Entry
129886884 CDS
T09577
Name
(RefSeq) beta-hexosaminidase 2 isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00511
Other glycan degradation
sdul00513
Various types of N-glycan biosynthesis
sdul00520
Amino sugar and nucleotide sugar metabolism
sdul00531
Glycosaminoglycan degradation
sdul00600
Sphingolipid metabolism
sdul00603
Glycosphingolipid biosynthesis - globo and isoglobo series
sdul00604
Glycosphingolipid biosynthesis - ganglio series
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
129886884
09103 Lipid metabolism
00600 Sphingolipid metabolism
129886884
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
129886884
00531 Glycosaminoglycan degradation
129886884
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
129886884
00604 Glycosphingolipid biosynthesis - ganglio series
129886884
00511 Other glycan degradation
129886884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sdul03110
]
129886884
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
129886884
Chaperones and folding catalysts [BR:
sdul03110
]
Intramolecular chaperones
Others
129886884
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
129886884
NCBI-ProteinID:
XP_055817745
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All DBs
Position
4:complement(20939388..20943828)
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AA seq
584 aa
AA seq
DB search
MRGEKTFSSFLPLFLISISFFIFISQTTATNYYPINVWPKPTTFHWPNPKSIFISPNFTI
SHPYHRYLTPAVDRYRRLILSENHRPIVSPAINLTSLIPLQSLIISVSDVTSPLAHGVNE
SYSLSTSSDVSSSAYAYITAETVWGAMRGLETFSQLVYGNPTRVAAGVYIHDLPIFTHRG
VMLDTSRNFYGVDHVLRLIKALSMNKLNVFHWHITDSHSFPLVIPSEPELAGKGAYGNEM
MYSPADVQKIVEYGLERGVRVLPEIDMPAHTGSWAEAYPEIVTCANMFWWPAGSSPALAA
EPGTGQLNPLIPKTYEVVKNVIQDTIAMFPDSLFHGGADEINSACWNTDPSVQKFVASNG
TLSQLLEKFINNTLPEIISLNRTVVYWEDVILSGNVKVNPSLLSPQNVIMQTWNGGPTNT
KQLVTSGYRVIVSSADYYYLDCGHGSFVGNDSRYDQPPGTDQGNGGSWCGPFKTWETIYN
YDITYGLTDDEAQLVIGGEVALWSEQADSTVMDSRIWPRASAMAETLWSGNRDETGMKRY
AEATDRLNEWRYRMVSRGIGAEPIQPLWCLKNPGMCNTVHPFTS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagaggagagaaaacattctcctcctttcttccactattccttatctccatttcattc
tttatcttcatttctcaaacaacagctacaaattattacccaattaatgtctggcccaag
cccacaacattccattggcccaacccaaaatccatcttcatctccccaaacttcaccatc
tcccacccataccaccgttacctcactcccgccgttgaccgttaccgccgactcatcctc
tccgagaaccaccgtcccatcgtctctccggcgatcaacctgacttcattaattccgtta
caaagcctcattatctccgtctccgatgtcacttcaccgctcgctcacggagtcaacgaa
tcctactctctctccacgtcttccgacgtctcctcctccgcctacgcctacatcactgcg
gagaccgtatggggagctatgcgagggctggagacattctcacaactcgtgtacggaaac
cctaccagagtcgcggccggcgtgtacatacacgatctgccgattttcacacaccgaggt
gtgatgttggacacttcgagaaacttctacggagtcgatcacgtgttaaggcttattaaa
gctctgagtatgaacaaattgaacgttttccactggcacataactgattcacattcattt
ccgcttgtgattccatcggagccggagctcgctggaaaaggagcgtacggcaatgagatg
atgtactcgccggcggacgtgcagaagatcgtggaatatggcctggagcgtggagttagg
gttttacctgaaattgacatgcctgcacatacaggatcttgggctgaagcttaccctgag
atagtcacttgtgcaaatatgttctggtggcccgctggaagtagtccagctcttgcagct
gaaccaggaactggtcaactgaaccccttgattcccaagacctatgaagtagtcaagaat
gtcattcaggacactatcgcgatgtttccagattcactctttcacgggggagcagatgag
atcaattcagcctgttggaatactgatccatcagtccaaaagtttgttgctagcaatgga
actctcagtcagctactcgagaagtttatcaataatactttacctgaaatcatctcactc
aaccgtacggtggtctactgggaggatgttatattgagtggtaatgtgaaagtgaatcca
tctctgctttctccacagaatgttattatgcaaacttggaatggtggcccaacgaataca
aagcagcttgtcacttctggctaccgtgtcattgtgtcatctgcagattactattacttg
gattgtggccatggaagcttcgttgggaatgacagccgctatgatcagccaccaggtact
gaccaaggcaatggtggatcctggtgtgggcctttcaagacctgggaaaccatttacaac
tatgatataacctatggcctgactgatgacgaggctcaattggtaattggaggggaagta
gcattatggtctgaacaagctgattcaactgttatggactcaagaatttggccaagagca
tcagcaatggcagaaaccttgtggtcagggaatcgcgatgaaacaggaatgaagagatac
gcagaggctactgatcgattgaatgaatggaggtacagaatggtttctaggggaataggt
gctgaaccgattcaaccactttggtgtctcaaaaatccaggcatgtgtaacacagttcat
ccatttactagctga
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