Solanum dulcamara (climbing nightshade): 129888990
Help
Entry
129888990 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129888990 isoform X1
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00052
Galactose metabolism
sdul00511
Other glycan degradation
sdul00600
Sphingolipid metabolism
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
129888990
09103 Lipid metabolism
00600 Sphingolipid metabolism
129888990
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
129888990
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
129888990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
Glyco_hydro_2
LacZ_4
Motif
Other DBs
NCBI-GeneID:
129888990
NCBI-ProteinID:
XP_055820052
LinkDB
All DBs
Position
5:complement(8752220..8802370)
Genome browser
AA seq
1110 aa
AA seq
DB search
MSSLTSQMVLPSNNGYKAWEDPYFFKWRKRDSHVPLHCHESVEGSLRYWNERNKVDLLIS
MSAVWDDDAVSKALDCAAYWVKDLPFVKSLSGIWKFWLSPGPTNVPLNFYDSSFQDSSWG
TIPVPSNWQMHGYDRPIYTNTIYPFAFNPPKVPDDNPTGCYRTFFFLPEEWEGRRIFLHF
EAVDSAFYAWVNGVPVGYSQDSRLPAEFEITGFCHPCGSGEGNCLAVQVMRWSDGSYLED
QDHWWLSGIHRDVLLLSKPKTFIADYFFRTNMAEDFSYADIEVEVKIDNSLKNNDISDFI
IEASLYDSGNWLSHSDHIDLLSANIAHLELVLSSDPCLGFKGYMLVGKVQAPKLWSAEKP
NLYTLVITLKDASGNLVDCESCQVGMRKISKAPKQLLVNGRPVVIRGVNRHEHHPRLGKT
NLESCMVKDLVLMKQNNINAVRNSHYPQHQRWYELCDLFGMYMVDEANIETHGFFDYPNY
KHPTQESCWAASMLDRVVGMVERDKNHACIIIWSIGNEASYGPNHAALSGWVREKDASRL
VHYEGGGSRTPSTDIVCPMYARVSTIVEIAKDPTEQRPLILCEYSHAMGNSNGNLHKYWE
AIDSIFGLQGGFIWDWADQGLLQEVRGKMRWAYGGDFGDTPNDLNFCLNGVIWPDRSPHP
ALHEIKLLYQPIKVSFKEGIIKIANMHFFDTTQALEFNWVLHGDGCELGSGILPLLVIEP
QRSHEIKWESGPWFSAWTSSSSAEIYLTITAKLLNSTRWANSGHLISSTQVLLPNRREVV
PHIIRSTNATLLCEVLDDIIKVGQKDWWELKFNKQTGGIEGWKVNGVSIMNKGIYPCFWR
APTDNDKGGGPLSYLSRWKAANLDKLIFVKKSCSVENMNSHEVKISATYHGIAKAEEETP
SNAETSRVLFKVGMTLLINGSGDVVLECNVNPCPDLPPLPRVGLEFQLDSTVDQVKWYGR
GPFECYPDRKSAAHLSIYELPVGEMHVPYVVPGECSGRADVRWVTFENKDGVGLYASTHG
GSPPMQMNASCYSTAELERTTHNEDLRKSENIEVHLDHKHMGLGGDDSWSPTVHDEYLVP
AVPYSFSIRFFPKTAATTGADIYKSQFSEE
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttaaccagtcaaatggttcttccatcaaataatggttacaaggcatgggaa
gatccttattttttcaagtggaggaaaagagactctcatgtcccactccattgccatgaa
tcagttgaaggatctctgagatactggaatgagcgcaacaaagtggatctattgatttcg
atgtcagcagtttgggatgatgatgctgtttctaaagctcttgattgtgctgcttactgg
gttaaggatttacctttcgttaaatcgttatctggcatatggaaattctggttgtctcct
ggccctacaaacgttccattgaatttttatgatagctcatttcaagattcttcatgggga
acaataccagttccttcgaattggcagatgcatggatacgaccgccctatttacacaaat
actatttatccatttgctttcaatccacctaaagttccagatgataatcctactggctgc
tacagaacttttttcttccttcctgaagagtgggaaggtcgtaggatatttttacatttt
gaagcggttgattcagccttctacgcttgggtgaatggagtcccagttggatatagtcag
gatagcagactccctgccgaatttgagatcacaggattttgccatccatgtgggtcagga
gaaggaaattgtctggctgttcaagtgatgagatggagtgatggttcctatcttgaagat
caggatcattggtggttatcagggatacaccgcgatgtgctacttctatcaaagcctaag
acgtttattgctgactatttcttcagaacaaacatggccgaagatttttcttatgcggac
atagaggtggaagtgaaaattgataactcactcaagaataatgatatttctgacttcatt
attgaagcttcactctatgacagtggaaattggcttagccactctgaccatattgatttg
ctttctgctaacattgctcatctggagttagttctgtcttctgatccttgtcttggattt
aaaggctacatgcttgtagggaaggtgcaagcacctaaactttggtctgcagagaaacca
aatctctacactcttgttatcacccttaaagatgcatcagggaacttggttgactgtgaa
tcatgccaagttggtatgagaaaaatatcaaaagccccaaaacagctgctagtaaatgga
cgtccagtagtaattagaggggtcaacaggcatgagcaccatccacgtcttggaaagaca
aacttggagtcctgcatggtcaaggatttggttttgatgaaacaaaacaatattaatgct
gtcaggaacagccattatcctcagcatcagcgctggtatgagttgtgtgatctgtttggc
atgtacatggtcgatgaggccaatatcgagacacatggtttttttgattatccaaactat
aagcatcctacacaggaatcttgttgggctgcttccatgctggatcgtgtggtcggcatg
gttgaaagggacaaaaatcatgcctgtattataatatggtccatagggaatgaggcaagc
tatggaccgaatcatgcagcactctctggttgggtacgagaaaaagatgcatcaagactg
gtgcactatgaaggtggtggatcgaggacaccttcaacagatattgtatgtcccatgtat
gcacgtgtgtccacaatagttgaaatagcaaaagatccaactgaacagaggcctttgata
ttgtgcgaatattcacatgccatgggaaacagcaatgggaatctccataaatattgggaa
gcaatagatagtatcttcggtctgcaaggaggctttatatgggattgggctgatcaggga
ttattacaggaagtacgtggaaaaatgcgctgggcatatggaggtgattttggggacact
cctaatgatttaaacttctgcctaaatggtgtcatatggcctgatcgaagtcctcatcct
gcattacatgagatcaagcttctttaccagccaatcaaggtctcatttaaagaaggaatt
attaagatagcaaacatgcatttctttgatactacccaagctttggagtttaactgggta
cttcatggcgatgggtgtgaacttgggtctgggatcctccctctacttgtcatagaaccc
cagagaagtcatgaaataaaatgggaatctggcccgtggttttctgcatggacttcatct
agttcagcggaaatttatttaacaattacagcaaagcttttgaactctactcggtgggct
aattctggtcacctcatttcgtccacacaagttctgttgcctaacagacgggaagttgtc
cctcacatcattagaagcaccaatgccacattactttgtgaagttcttgatgacataatt
aaggttgggcagaaggactggtgggagctgaaatttaacaaacaaactggtggtatagag
ggctggaaggttaatggagtttcaataatgaataaaggcatctatccatgcttttggaga
gcaccaacagataatgacaaagggggagggccactgagttacttgtctaggtggaaggct
gctaatctggacaaactaatctttgtgaaaaaaagctgctctgttgaaaatatgaacagt
cacgaagtgaaaatatcagctacttatcatggcatagcaaaagcagaggaggaaactccc
tcaaatgcggaaacttctagagttctctttaaggttggcatgacacttttgataaatggt
tcaggagatgttgtgctagagtgcaatgtaaacccatgtcctgatcttccacctttgcca
cgagtcgggcttgaatttcaattggattcaactgtagaccaggttaaatggtacggaagg
gggccatttgaatgttatccagaccggaaatctgctgctcatttaagcatttatgagcta
cccgtaggtgaaatgcatgtgccatatgttgttcctggggaatgctcaggcagagcagat
gttagatgggtgacatttgaaaataaagatggagtaggactttatgcttccacacatgga
ggctctccacccatgcaaatgaatgcaagctgctacagcaccgctgagctcgagagaact
acacacaatgaggatctcaggaaaagtgaaaacatcgaggtgcatcttgaccacaaacac
atgggtttgggcggagacgatagctggtcccctactgttcatgatgaatatcttgttcct
gccgtgccatactctttctccattaggtttttcccaaaaactgcagcaaccactggggct
gatatctacaagtctcaattctctgaagagtga
DBGET
integrated database retrieval system
