KEGG   Solanum dulcamara (climbing nightshade): 129890074
Entry
129890074         CDS       T09577                                 
Name
(RefSeq) cyclin-dependent kinase D-3-like
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03022  Basal transcription factors
sdul03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    129890074
  09124 Replication and repair
   03420 Nucleotide excision repair
    129890074
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:sdul01001]
    129890074
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sdul03021]
    129890074
   03019 Messenger RNA biogenesis [BR:sdul03019]
    129890074
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129890074
Enzymes [BR:sdul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     129890074
    2.7.11.23  [RNA-polymerase]-subunit kinase
     129890074
Protein kinases [BR:sdul01001]
 Serine/threonine kinases: CMGC group
  CDK family
   129890074
Transcription machinery [BR:sdul03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     129890074
Messenger RNA biogenesis [BR:sdul03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     129890074
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     129890074
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Seadorna_VP7 Haspin_kinase
Other DBs
NCBI-GeneID: 129890074
NCBI-ProteinID: XP_055821572
LinkDB
Position
5:77910569..77918101
AA seq 419 aa
MSEVEKLLAMNRKVADRYLKREVLGEGTYGVVYKAIDTKSGQVVAIKKIRIGKQKEGVNF
TALREIKLLKELKDPSVIELIECFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSY
IQMTLKGLAFCHKKWVLHRDMKPNNLLIGPHGQLKLADFGLARIFGSPDRRFTHQVFARW
YRAPELLFGAKQYGPGVDVWAAACIFAELLLRRPFLQGNSDIDQLGKIFAAFGTPKPSQW
PDMIYLPDYVEYQYVPGQPFKTLFPTATDDCLDLLSKMFTYDPKVRISAQQALEHRYFSS
GPPPTEPALLPRPPPKREPANPKVSDLNPHDGPVVLSPPRKSRRVMPHREGFEANVHPEK
MDDHGNEIRQAAGERSEQVPMSLDFSVFGTKPPTRPTINSADRSHLKRKLDLEFQPEEE
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgtccgaagtagagaaattattggctatgaataggaaagtagcagatcgttatctgaaa
cgagaagttcttggcgaaggtacttatggtgttgtctacaaggcgattgatacgaagagc
ggccaggttgttgctatcaagaaaattcgtattgggaaacagaaggaaggggtgaatttt
actgccctgagggaaatcaaattattgaaagagctgaaggatcctagcgttattgaattg
attgagtgcttcccgcacaaaggaaacttgcatcttgtgtttgagttcatggagacagat
ctcgaggctgtgattcgtgataggaatatcttcctctcacctgcggatataaaatcttat
atccagatgacattgaaaggtcttgctttttgtcacaagaaatgggtcttgcatagagat
atgaaaccaaacaatttactgattggacctcatgggcagcttaagcttgctgactttgga
ttagcacgaatatttggtagccctgacagaagattcactcatcaggtttttgcccggtgg
tacagagcaccagagttattgtttggtgcgaagcagtatggacctggagtagatgtttgg
gctgctgcatgtatctttgctgagctcctcctgcggcgaccatttttgcagggaaacagt
gatattgatcagctagggaagatttttgcggcctttgggaccccgaagccttcacaatgg
cctgatatgatctacttgccagattatgttgagtaccaatatgtccctggacagccattc
aaaacactgtttccaacggctactgatgattgcctggatcttctgtcaaagatgtttacg
tacgatccaaaagttaggatctcagcacagcaagcattggagcatcggtacttctcatca
ggacctccacctacggaaccagctctgcttccaagacctccccctaagcgagagcctgca
aatcctaaggtgtcagatctgaatccacatgatggtcctgtggtattgtctccaccaaga
aagtcaagaagagtgatgcctcatcgcgaaggatttgaggcaaatgtgcacccagaaaag
atggatgaccatggaaatgagatccgacaagctgctggtgaaaggagtgaacaagtaccc
atgtcactggatttctctgtctttgggactaaaccacctactagaccgaccattaacagt
gcagacagatcacatttgaaaaggaaattagatcttgaattccaacccgaagaggaataa

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