Solanum dulcamara (climbing nightshade): 129892001
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Entry
129892001 CDS
T09577
Name
(RefSeq) syntaxin-132-like isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
129892001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdul04131
]
129892001
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdul04147
]
129892001
Membrane trafficking [BR:
sdul04131
]
SNARE
Syntaxin (Qa)
Stx-PM
129892001
Exosome [BR:
sdul04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
129892001
Exosomal proteins of other body fluids (saliva and urine)
129892001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Tropomyosin
Gag_p24_C
Wtap
FlaC_arch
Stonustoxin_helical
DUF5345
Sipho_Gp157
Motif
Other DBs
NCBI-GeneID:
129892001
NCBI-ProteinID:
XP_055823491
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Position
6:complement(8703371..8720421)
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AA seq
305 aa
AA seq
DB search
MNDLLADSSFVSVKDNASKESDIEMGNRFTRSQSDSGIESFNKQIQEIERQVEKLSGLLM
TLKDANEETKSVTKASAMKAIRKRMEKDIDEVGKIARNVKAKIEAINKENLANRQKPGCG
KGTSVDRSRTNMTNALTKKFRDVMTEFQTLRQRIDNEYREVVERRVITVTGTRPDEETIN
NLIETGNSEQIFQNAIQGMGRGQVLSTVEEIQERHDAVKEIERKLLDLHQIYLDMAVLVE
AQGDLLDNIETQVRYAVDHVNMGTDALQTAKSLQKKSRKCMMIAIILLLIIAAIIVLSVI
KPWKK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccttctagcggattcaagcttcgtttctgtcaaagataatgcttccaaagaa
tctgatatcgagatgggaaaccgatttacgaggagccagtcagattctggaatcgagagc
tttaacaagcagatacaagaaatcgagagacaggtcgagaaactttctggtttactgatg
actcttaaggatgctaatgaggaaacaaaatctgttactaaagcatcagcaatgaaagct
ataaggaagcggatggagaaagatatagatgaagttgggaagattgcaagaaatgtcaaa
gcaaaaatagaagcaataaataaagagaacttggctaatcgacaaaagcctggatgtgga
aagggtacaagtgttgacagatcaaggacaaatatgactaatgccttgacaaagaagttc
agagatgtcatgactgaatttcagacattaaggcagaggatagacaacgaatatcgtgaa
gttgtagagcgaagggtgatcacagtaactggaactagaccagatgaggagacaatcaac
aacctgatagaaactggaaacagtgaacaaatcttccagaacgctatccaaggaatggga
cgtgggcaggtcttaagcaccgtagaagaaattcaggaaagacacgatgcagtgaaggaa
attgagagaaagcttcttgatctgcatcagatttatctagatatggctgttctggttgaa
gctcaaggagacttgttagataatatcgaaacacaggtgagatatgcagtggatcacgtt
aatatgggtacagatgcacttcaaactgcaaagagcttgcagaaaaaatcaagaaaatgt
atgatgatagccataattttgcttctaattatcgccgcgattatcgttctctctgtgatc
aaaccttggaagaagtaa
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