Solanum dulcamara (climbing nightshade): 129892595
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Entry
129892595 CDS
T09577
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00040
Pentose and glucuronate interconversions
sdul01100
Metabolic pathways
Module
sdul_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
129892595
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
129892595
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
129892595
NCBI-ProteinID:
XP_055824150
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Position
6:complement(14200969..14204414)
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AA seq
398 aa
AA seq
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MELNIKVLFAFILILFLARLGDAESPAVFDVTKFGATPNGDISKAILDAFKEACASTSPS
KIVIPKGTFPMKQVKLEGPCKAPLEFQVQGTLQASPDPKLLPQGEWFTVNYLDHFTLSGT
GIFDGQGKAAWAQNDCAKTKCAHLPYNLSFNFLKSSTIQDITSKDSKNFHMNVNGCNNLT
FIRVKITAPPESINTDGIHVARSNNVNIMDTVIGTGDDCISIGDELQQLHITRVTCGPGH
GISVGSLGRTPGEKPVVGVYVKNCTFINTDNGVRIKTWPASHQGVVTELHYEDIIVQNVS
NPIVIDQVYCPYNQCNKALPSQVKISKVSIKNVRGTSRTQDAVLLICSKGVPCEGVEVGD
IDISYNGKEGPAKSICENVKPTFVGKQNPPVCAGAQTS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaatattaaggtattatttgcatttatattaatattatttttagcacgactt
ggagacgctgagtcaccagcagtgtttgatgttaccaaatttggtgcaacacctaatgga
gatatcagtaaggcaatattggatgcatttaaagaggcatgtgcatcaacaagtccaagt
aaaatagtgataccaaaagggacatttccaatgaagcaagtaaaattagaaggtccatgc
aaggcacctcttgagtttcaagtccaaggcactttacaagcttctccagatcctaaacta
ctccctcaaggtgaatggtttactgttaattacctcgatcatttcacactatctggcact
ggtatttttgatggacaaggtaaagctgcttgggctcaaaatgattgtgccaaaaccaag
tgcgcccatcttccctataatttgagcttcaacttccttaaaagttcgacaatccaagac
ataacttcaaaagatagcaaaaattttcatatgaacgttaacggttgcaacaacttgaca
ttcatccgagttaaaatcacagctccaccagaaagcatcaacaccgatggtatccacgtt
gctcgatcgaacaacgtgaacatcatggatactgtaattggaacaggagatgattgtatc
tctattggtgatgaattgcaacaacttcatattactagagttacttgtggacctggacat
ggtattagtgttggaagtcttggaaggactcctggtgaaaagcctgtggtgggagtttat
gtgaaaaattgtacatttattaatactgataatggtgttaggatcaagacatggccagct
tcacatcaaggtgttgtcactgagttgcattatgaagatattattgtgcaaaatgttagc
aaccctattgttattgatcaagtctattgcccatacaatcaatgcaataaagctttgcca
tcacaagtgaagataagcaaagtgagcataaaaaatgtaaggggtacatcaagaacacaa
gatgcagtgctactaatatgcagtaaaggagtaccatgtgaaggagttgaagttggagac
atagacatttcctataatggaaaagaaggaccagccaagtctatatgtgagaatgtcaag
cctacttttgtagggaagcagaatccacctgtctgtgctggagctcagacttcttga
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