Solanum dulcamara (climbing nightshade): 129900929
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Entry
129900929 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129900929
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129900929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129900929
Enzymes [BR:
sdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
129900929
DNA repair and recombination proteins [BR:
sdul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129900929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
129900929
NCBI-ProteinID:
XP_055831988
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All DBs
Position
8:complement(55718415..55721404)
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AA seq
379 aa
AA seq
DB search
MCSSKTKLQSSPQTLSQINGRSVLQPHSNIVPLFERRNSLKKTTNSAAPVTTNGSTKVKM
SSATTPPVSPKMKSPAIKRGNNIDLNGLSSSAEKVVTANKSPTLLKKPKKSSASPPSVEN
SSLKYSSSLIVEAPGSIAAARREQVAIAQVQRKMKIAHYGRTKSAKSSLDPSFSSAVSPH
PREEKRCSFITPNSDPLYIAYHDEEWGVPVHNDNLLFELLVLTGAHVGSDWTSVLKKRQE
FRDAFSGFDPEIVSKYNEKKITSTSVEYGIELSQVRGAVDNSNRILEIKKTFGSFDKYLW
GFVNNKPIATQYKACNKIPVKTSKSETISKNMVKRGFHYVGPTVIHSFMQAAGLTNDHLI
ACPRHLQCVALSTQPPPAL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcttccaaaactaaactgcagagtagcccacaaactctctcccagatcaatggc
cgctctgttcttcaaccacatagcaatatagttcctctttttgagcgacgcaattcactc
aaaaagacaactaacagtgccgctcctgttactacaaatggaagtactaaagtcaagatg
agttcagcaacaactccaccggtctcacctaaaatgaagtcgcccgctatcaagagagga
aacaacattgatctcaatggtttgagttcaagtgctgagaaagttgtgacagctaataaa
tccccaactttattaaagaagcctaagaaaagtagtgcttcacccccttctgtggagaat
tcttcattgaaatattcttcctccttgatagtcgaggctccgggaagcatagcagcagca
agaagggaacaagttgcaatagcgcaagtgcagaggaaaatgaaaattgcacattatgga
agaactaaatcagccaagtcttctcttgacccttcattctcctcagcagttagcccccat
cctcgagaggaaaaaagatgcagctttatcacgcctaattctgaccctctttacattgcc
taccatgatgaagaatggggagttcccgtccataatgataatctgctttttgagttgctg
gtgttaactggtgcacatgttggatcggactggacttcagttttaaagaaaaggcaagaa
ttcagggatgccttttcaggatttgatccagaaattgtttccaagtataatgaaaagaag
ataacctcaacaagtgtcgaatatggtatagagcttagccaagtccgaggagctgtcgac
aactctaacagaattttagagataaagaagacatttggttcattcgacaagtatctgtgg
ggatttgtgaacaacaagcccattgcaacacaatacaaggcatgcaacaaaatcccagtg
aagacctcaaaatcagaaaccataagcaaaaacatggtgaaaagaggcttccactacgtt
ggcccaactgttatacactccttcatgcaggcggccggcctcaccaacgaccacctgatc
gcctgcccacgacatctccagtgcgtggcattgtcaactcaaccaccccctgccctataa
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