Streptomyces decoyicus: K7C20_31480
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Entry
K7C20_31480 CDS
T07553
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
sdw
Streptomyces decoyicus
Pathway
sdw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K7C20_31480 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdw03400
]
K7C20_31480 (uvrA)
DNA repair and recombination proteins [BR:
sdw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K7C20_31480 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K7C20_31480 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_16
AAA_29
DnaJ_CXXCXGXG
nSTAND1
SMC_N
AAA_25
AAA_33
NACHT
AAA_22
Viral_helicase1
cobW
DUF5351
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QZY19190
LinkDB
All DBs
Position
7211329..7213788
Genome browser
AA seq
819 aa
AA seq
DB search
MADSYVRVRGAREHNLRSIDVDIPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYFESVA
PYARRLIHQVGAPKVEDITGLPPAVALEQRRSAPTSRSSVGTVTTLSNTLRMLFSRAGDY
PEGVAERLDSDAFSPNTAAGACPECHGLGTVHRVTEESLVPDPSLSLREGAVAAWPGAWQ
GKNLRDILAALGYDIDRPWGELPQADRDWILFTDEQPVVTVHPVRDVGRIQRPYKGQYMS
AKRYVLHTFADSKSETLRGRVQGFMVAEPCPVCHGRRLRPEALAVTFEGHDIATLAGRPL
SALAQLLRPTAGRTDDEVAPVLARDLVARIDVLTELGLGYLSMDRPSPTLSAGELQRLRL
ATQLRSGLFGVVYVLDEPSAGLHPADTESLLTVLGRLKEAGNSLFVVEHDMDVVRRADWI
VDVGPQAGEHGGQVLHSGPVAALADAADSATRRFLFDTAPPAERTVRSPSGTLTLRGATL
HNLRGLDATFPLGVFTAVTGVSGSGKSTLVTRVLADAVRDHLGAGEEQDAADGDGTGTGP
MARAQLTGAEGLEAVDRLVRVDQKPIGRTPRSNLATYTGLFDAVRKVFAATDEARARGYT
AGRFSFNVAAGRCETCQGEGFVAVELLFLPGTYAPCTACHGARYNPETLQITYRGRTVAE
VLAMTVDDAAEFLADVPAAARSLRTLHDVGLGYLRLGQPATELSGGEAQRIKLATELQRT
RRGHTLYLLDEPTTGLHPADTEVLLRQLHGLVDAGHTVVVVEHDMGVVAGADHVIDLGPG
GGADGGRIVAAGTPAEVAAAPDSRTAPYLARRRARPDGS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggccgactcgtatgtacgggtgcgcggcgcccgtgagcacaacctccgcagcatcgat
gtggacatcccgagggacgcgctggtcgtgttcaccggggtgtccggatcgggcaagtcc
tccctcgccttcggcaccctctacgccgaggcgcagcgccgctacttcgagtcggtggcc
ccctacgcccgacggctgatccaccaggtgggcgcgcccaaggtcgaggacatcaccggg
ctgccgcccgccgtcgccctggaacagcggcgctccgcgcccacctcccgctcctcggtc
ggcaccgtcaccaccctctccaacaccctgcgcatgctcttctcccgcgccggcgactac
ccggagggcgtagcggaacggctcgattccgacgcgttctcacccaataccgcggccggg
gcctgcccggaatgtcacggcctggggaccgttcaccgcgtcaccgaggaatcactggtc
cccgacccctcgctgtccctccgcgagggtgccgtcgccgcctggccgggcgcctggcag
ggcaagaacctccgcgacatcctcgccgccctcgggtacgacatcgaccggccctggggc
gagctcccgcaggccgaccgggactggatcctgttcacggacgaacagccggtcgtcacc
gtgcacccggtccgcgacgtgggccggatccaacgcccctacaagggccagtacatgagc
gccaaacgctatgtgctgcacaccttcgccgactccaagagcgagacgctgcgggggcgc
gtccaggggttcatggtcgccgagccctgcccggtgtgccacggacggcggctgcgcccg
gaggcgctggccgtcaccttcgagggccatgacatcgccaccctcgcgggccgcccgctg
agcgccctcgcacagctgctgcggcccaccgccgggcggacggacgacgaggtggcgccg
gtgctggcccgcgacctggtggcccgtatcgatgtcctcaccgaactcggcctgggctat
ctgagcatggaccggccctcgcccaccctgtccgccggcgaactccagcggctgcggctc
gccacccagctgcgctccggcctcttcggcgtcgtctacgtcctggacgagccgtccgcc
ggtctccaccccgccgacacggagtccctgctcacggtgctgggccggctcaaggaagcg
ggcaactcgctgttcgtcgtcgagcacgacatggacgtggtgcgccgcgccgactggatc
gtggacgtcggcccgcaggccggggaacacggcggacaggtgctgcacagcggccccgtc
gccgcgctcgcggacgccgccgactccgccacccgccggttcctcttcgacaccgcaccg
cccgccgagcgcacggtgcgcagcccctcgggcacactcaccctccgcggggccaccctg
cacaatctgcgcggcctggacgcgaccttcccgctcggcgtcttcaccgccgtcaccggc
gtctcgggatcgggcaaatcgaccctggtcacccgcgttctcgcggacgccgtacgggac
cacctcggcgcgggcgaggagcaggacgccgccgacggggacggcaccggcaccggaccg
atggcacgggcgcaactcaccggcgccgagggcctggaggcggtcgaccggctggtacgc
gtcgaccagaagccgatcggccggaccccgcgctccaacctcgccacctacaccgggctg
ttcgacgcggtacgcaaggtcttcgccgccaccgacgaggcccgcgcccgcggctacacg
gcggggcggttctccttcaacgtcgccgccggccgctgcgagacctgccagggcgagggc
ttcgtggccgtggaactcctcttcctgcccggtacgtacgccccctgcaccgcctgccac
ggcgcccgctacaaccccgagaccctccagatcacctaccggggccggaccgtcgccgag
gtgctggcgatgaccgtcgacgacgccgccgagttcctcgccgatgtccccgcggccgcc
cgcagtctgcgcaccctccatgacgtgggcctgggctatctgcggctcggccagcccgcg
accgaactgtccgggggcgaggcacagcgcatcaagctcgccaccgaactccagcggacc
cgccgcggccacaccctctacctcctcgacgagcccaccaccggactgcaccccgccgac
accgaggtgctgctgcgccagctgcacggcctggtcgacgccggccacaccgtcgtggtc
gtcgagcacgacatgggggtggtcgccggcgccgaccacgtcatcgacctcggccccggc
ggcggtgcggacggcggccggatcgtggcggcgggcaccccggccgaggtcgcggcggca
ccggacagccgtaccgcgccctacctggcccggcggagggcgcggccggacggctcttga
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