Shigella dysenteriae Sd197: SDY_0395
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Entry
SDY_0395 CDS
T00306
Symbol
gcl
Name
(GenBank) glyoxylate carboligase
KO
K01608
tartronate-semialdehyde synthase [EC:
4.1.1.47
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy00630
Glyoxylate and dicarboxylate metabolism
sdy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SDY_0395 (gcl)
Enzymes [BR:
sdy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.47 tartronate-semialdehyde synthase
SDY_0395 (gcl)
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Motif
Pfam:
TPP_enzyme_M
TPP_enzyme_N
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
ABB60607
ShiBASE_China:
SDY0395
UniProt:
Q32JA0
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Position
complement(379362..380921)
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AA seq
519 aa
AA seq
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MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIRHILVRHVEGASHMAEG
YTRATAGNIGVCLGTSGPAGTDMITALYSASADSIPILCITGQAPRARLHKEDFQAVDIE
AIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLVDLPFDVQVAEIEFDPDMYEP
LPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGVINADAAALLQQFAELTSVPVIPTLMG
WGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFGIGNRFANRHTGSVEKYTEGRKIVH
IDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQEMQKAGRLPCRKEWVADCQQRKRTLL
RKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTTIGLSQIAAAQMLHVFKDRHWINCGQAGP
LGWTIPAALGVCAADPKRNVVAISGDFDFQFLIEELAVGAQFNIPYIHVLVNNSYLGLIR
QSQRAFDMDYCVQGNDSNLLIVFYVQIMPDDFVMQLHRF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatgagagccgttgacgcggcaatgtatgtgctggagaaagaaggtatcacc
accgccttcggtgttccgggagctgcaatcaatccgttctactcagcgatgcgtaagcac
ggcggtattcgtcacattctggtgcgtcatgtggaaggtgcttcgcacatggcggaaggt
tatacccgcgcaacggcagggaatatcggcgtatgtctggggacttccggtcctgcgggc
acggacatgatcaccgcgctctattctgcttctgctgattccattcctattctgtgcatt
accggccaggctccgcgcgcccgtctgcataaagaagattttcaggccgtagatattgaa
gcaattgctaaaccggtcagcaaaatggcggttacagtacgtgaagcggcgctggtgcct
cgcgtgctgcaacaggcatttcacttgatgcgttctggtcgtccgggtccggtactggtg
gatttaccgttcgacgttcaggttgcagaaatcgagtttgatcctgacatgtacgaaccg
ctgccggtctacaaacctgctgccagccgtatgcagatcgaaaaagctgtagaaatgtta
atccaggccgaacgtccggtgattgttgccgggggcggggtaatcaatgctgacgcagct
gcactgttacaacagtttgctgaactgaccagcgttccggtgatcccaacgctgatgggc
tggggctgtatcccggacgatcatgaactgatggccgggatggtcggtctgcaaaccgcg
catcgttacggtaacgcaacgttgctggcgtccgacatggtgtttggtatcggtaaccgt
tttgctaaccgtcataccggttcggtagagaaatacaccgaagggcgcaaaatcgttcat
atcgatattgagccgacgcaaattggtcgcgtgctgtgtccggatctcggcattgtctct
gatgctaaagcggcgctgacactgctggttgaagtggcgcaggagatgcaaaaagcgggt
cgtctgccgtgtcgtaaagaatgggtcgccgactgccagcagcgcaaacgcactttgctg
cgcaaaacccacttcgacaacgtgccggtgaaaccgcagcgcgtgtatgaagagatgaac
aaagcctttggtcgcgatgtttgttatgtcaccaccatcggtctgtcacaaatcgctgcg
gcacaaatgctgcatgtctttaaagaccgccactggatcaactgtggtcaggctggtccg
ttaggctggacgattccggctgcgctaggggtttgtgccgctgatccgaaacgcaatgtg
gtggcgatttctggcgactttgacttccagttcctgattgaagagttagccgttggcgcg
cagttcaacattccgtacatccatgtgctggtgaataactcctatctcggcctgattcgt
cagtcacaacgcgcctttgacatggactactgcgtgcaaggtaatgactctaacttattg
atagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga
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