Shigella dysenteriae Sd197: SDY_2207
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Entry
SDY_2207 CDS
T00306
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy00521
Streptomycin biosynthesis
sdy00523
Polyketide sugar unit biosynthesis
sdy00541
O-Antigen nucleotide sugar biosynthesis
sdy01100
Metabolic pathways
sdy01110
Biosynthesis of secondary metabolites
sdy01250
Biosynthesis of nucleotide sugars
Module
sdy_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SDY_2207 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SDY_2207 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SDY_2207 (rfbC)
Enzymes [BR:
sdy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SDY_2207 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ABB62292
ShiBASE_China:
SDY2207
UniProt:
Q32EG3
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All DBs
Position
2009705..2010262
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AA seq
185 aa
AA seq
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MNVIKTEIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKSTKGVLRG
LHYQLEPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWIGVNLSAENKRQLWIPEGFAHG
FLVLSETAEFVYKTTNYYNPSFEKSISYSDPTIKIQWPNLQDMHFKLSNKDLNAKNFFNN
NSLMQ
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaattaaaactgaaattccagatgtattaattttcgagccgaaagtttttggt
gatgaacgtggtttttttatggaaagctttaaccagaaagttttcgaagaggctgtaggg
cggaaggttgaatttgttcaggataaccattctaaatcaactaagggtgtgttacgcgga
ctgcactatcagttggaaccttatgctcaaggtaaattagttcgttgtgttgtcggtgaa
gtttttgatgtagcagttgatattcgtaaatcgtcacctacatttgggaaatggattggg
gtgaatttgtctgctgagaataagcgtcagttgtggatacctgaaggatttgcgcatgga
tttttggtgctgagtgaaacggctgagtttgtttataaaacaacaaactattacaatcca
agttttgaaaaaagtatttcatactcagatcctaccattaaaattcagtggcccaattta
caggatatgcattttaaattatcaaataaggatttgaatgctaagaacttttttaataac
aatagtttaatgcaatga
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