Sphingomonas echinoides: B18_01085
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Entry
B18_01085 CDS
T06681
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sech
Sphingomonas echinoides
Pathway
sech03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sech00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
B18_01085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sech03400
]
B18_01085
DNA repair and recombination proteins [BR:
sech03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
B18_01085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
QLD72526
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Position
245731..248298
Genome browser
AA seq
855 aa
AA seq
DB search
MTDLSQHTPMMQQYFKLKHQHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSGG
KAIPMAGIPFHSAEGYLAKLVKLGESVAICEQIGDPATSKGPVERQVVRIITPGTVSDEA
LLDERRDNLLAAILGDERLFGLAVLDITSGRFSVQEIKGWETLLAELERLNPAELLIPDD
WPQGLPAEKRRGVRRRAPWDFDRDSAHKSLCQQFGTQDLKGFGCQNLTLAIGAAGCLLAY
AKETQRTALPHLRSLRHDRLDDTVILDGASRRNLELDINLSGGRENTLQSVVDRCQTAMA
SRLMSRWLNRPLRDRAVLEARQESIACLLERYRFENLQPQLKEIGDLERILARIGLRNAR
PRDLARLRDALAALPDLQNAMTELEAPHLQALATTIGTYPELAELLAKAIIDNPPAVIRD
GGVIKTGYDAELDELQALSENAGQFLMDLEAREKARTGLPNLKVGYNRIHGYFIELPRVQ
AEQAPADYIRRQTLKGAERFITPELKAFEDKALSAQSRALAREKALYEELLERLIGHLAP
LQDSASALAELDVLANLAERALNLDLNRPRFVEHTCLHIEQGRHPVVEQVLETPFVANDL
ALDADTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAARCELSLVDRIFTRIGSSD
DLAGGRSTFMVEMSETANILHNATDKSLVLMDEVGRGTSTFDGLSLAWAAAEDLARTRAF
TLFATHYFELTVLPESQPAVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVP
APVIQRAREHLKRLETTSLPHEMPSQQSGKPASPMQSDLFASLPHPVIDELSRINPDDIS
PRQALDLLYAWKMRV
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacctctctcagcacacgccgatgatgcagcagtacttcaaactgaagcatcag
caccccgaccaattgatgttctatcgcatgggcgacttctacgagctgttctacgaggac
gcgaagaaggccgccaaactgctcgacatcaccctgaccgcacgcggccagtccggcggc
aaggcgatcccgatggcaggcattcccttccattcggcggagggctacctggccaagctg
gtcaagctcggcgagtcggtggcgatctgcgagcagatcggcgacccggccaccagcaag
gggccggtggagcgccaggtggtgcggatcatcacccccggcacggtgagcgacgaggcg
ctgctcgacgaacgccgcgacaacctgctggcggcaatcctcggcgacgagcgcctgttc
ggcctcgccgtgctggacatcaccagcggccgcttcagcgtccaggagataaaaggctgg
gaaaccctgctggccgaactggagcgcctcaacccggccgagctgctgattcccgacgac
tggccacagggcctgccggcggagaagcgccgcggcgtacgtcgccgcgcgccgtgggac
ttcgatcgcgactcggcgcacaagagcctctgccagcaattcggcacccaggacctgaaa
ggcttcggctgccagaacctgaccctggccatcggcgccgccggctgcctgctcgcctac
gccaaggaaacccagcgtaccgccctgccgcacctgcgcagcctgcgccacgaccgcctc
gatgacacggtgatcctcgacggtgccagccgccgcaacctggagctggatatcaacctc
agcggtggccgcgagaacaccctgcaatcggtggtcgaccgctgccagaccgccatggcc
agccgcctgatgagccgctggctgaaccgtccgttgcgtgaccgcgcggtactggaagcc
cgccaggagtccatcgcctgcctgctggaacgctaccgcttcgagaacctgcaaccgcag
ctcaaggaaatcggcgacctcgaacgcatcctcgcccgcatcggcctgcgcaacgcccgc
cctcgcgacctggcgcgcctgcgcgacgcgctggcggcgctgccggacctgcagaacgcc
atgaccgaactggaagcgccgcacctgcaggcgctggccaccaccatcggcacctatccc
gaactcgccgaactgctggccaaggcgatcatcgacaacccgccagcggtgatccgcgac
ggtggcgtgatcaagaccggctatgacgccgagctggacgagctgcaggcgctgagcgaa
aacgccgggcaattccttatggacctggaagcgcgcgagaaggcccgcaccggcctgccc
aacctgaaggtcggctacaaccgcatccatggctacttcatcgagctgccacgggtacag
gccgaacaggctccggccgactacatccgccggcagaccctgaaaggcgccgagcgcttc
atcacgccggaactgaaggccttcgaggacaaggcgctgtcggcccagagccgcgccctg
gcccgcgagaaggcgctctacgaagagctgctggaacgcctgatcggccacctcgctccg
ctccaggacagcgcctcggcgctggcggaactggacgtgctggcgaatctcgccgaacgc
gcgctgaacctcgacctgaatcgcccacggttcgtcgaacacacctgcctgcacatcgag
cagggccgccatccggtggtcgagcaggtgctggagacaccgttcgtggccaacgacctg
gcgctggatgccgacacccggatgctggtgatcaccggtccgaacatgggcggtaaatcc
acctacatgcggcaaaccgcgctgatcgtgctgcttgcgcacatcggcagcttcgttccg
gctgcacgctgcgagctgtccctggtggaccgcatcttcacccgcatcggctcgtccgac
gaccttgccggcggccgctcgaccttcatggtggagatgagcgaaaccgccaacatcctg
cacaacgccaccgacaagagcctggtgctgatggatgaggtcggccgcggcaccagcacc
ttcgacggcctgtcgctggcctgggcagcggccgaggacctggcccggactcgcgccttc
accctgttcgccacccactatttcgaactgaccgtactgccggaaagccagcccgcggta
gccaacgtgcacctgaacgcgaccgagcacaatgaacgcatcgtgttcctgcaccatgta
ctgccgggaccggcgagccagagctacggcctcgcggtggcccagttggccggcgtgccg
gccccggtaatccagcgcgcccgcgaacacctcaagcgcctggaaaccaccagcctgccg
cacgagatgccgagccagcagagcggcaagcccgcctcgccgatgcagagcgacctgttc
gccagcctgccgcacccggtgatcgatgaattgtcgaggatcaatcccgacgatatcagc
ccgcggcaagctctcgatctgttatatgcatggaagatgcgggtctga
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